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RTP_07252018_0_1um_scaffold_4232

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_4232_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..649
DNA (648bp) protein (216aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7W9_NIAKG
integral membrane sensor signal transduction histidine kinase
RTP_07252018_0_1um_scaffold_4232_2

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comp(618..914)
DNA (297bp) protein (99aa)
Marine sediment metagenome DNA, contig: S12H4_L05551 {ECO:0000313|EMBL:GAI74030.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RTP_07252018_0_1um_scaffold_4232_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(1221..1886)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036CDE54
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_4232_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(1983..4025)
DNA (2043bp) protein (681aa)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGM1_NIAKG
1,4-alpha-glucan-branching protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_4232_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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4147..6918
DNA (2772bp) protein (924aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003760607
TonB-dependent receptor
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_4232_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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6893..7624
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGM3_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_4232_7
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(7752..7943)
DNA (192bp) protein (64aa)
Cold-shock DNA-binding protein family id=2917951 bin=GWF2_Bacteroidetes_40_14 species=unknown genus=Gillisia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
cold-shock DNA-binding domain-containing protein
Tax=GWF2_Bacteroidetes_40_14_curated
RTP_07252018_0_1um_scaffold_4232_8
unknown

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comp(7955..8041)
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 8 items

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