ggKbase home page

RTP_07252018_0_1um_scaffold_4377

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_4377_1
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..1346
DNA (1344bp) protein (448aa)
Signal transduction histidine kinase, LytS n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZU4_DYAFD
Putative two-component histidine kinase {ECO:0000313|EMBL:GAO42545.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
signal transduction histidine kinase LytS
RTP_07252018_0_1um_scaffold_4377_2
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1343..2110
DNA (768bp) protein (256aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZU5_DYAFD
Putative two-component response regulator {ECO:0000313|EMBL:GAO42544.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
LytTR family two component transcriptional regulator
RTP_07252018_0_1um_scaffold_4377_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2168..2575)
DNA (408bp) protein (136aa)
Methylmalonyl-CoA mutase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJW0_NIAKG
Methylmalonyl-CoA mutase domain protein
Methylmalonyl-CoA mutase domain protein {ECO:0000313|EMBL:AEW01858.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
RTP_07252018_0_1um_scaffold_4377_4
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

2653..3648
DNA (996bp) protein (332aa)
Putative oxidoreductase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AI95_IGNAJ
oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:AFH48702.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
RTP_07252018_0_1um_scaffold_4377_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3753..5306)
DNA (1554bp) protein (518aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003680A3F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17328.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
RTP_07252018_0_1um_scaffold_4377_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5408..7114)
DNA (1707bp) protein (569aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036ACF56
glutamyl-tRNA synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 6 items

View Taxonomy