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RTP_07252018_0_1um_scaffold_4615

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_4615_1
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..321
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XXY7_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU04405.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
RTP_07252018_0_1um_scaffold_4615_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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602..1075
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F7A95
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_4615_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1215..1643)
DNA (429bp) protein (143aa)
GCN5-related N-acetyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL34_NIAKG
N-acetyltransferase GCN5
Acetyltransferase {ECO:0000313|EMBL:KIC96154.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
RTP_07252018_0_1um_scaffold_4615_4
unknown

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1658..1837
DNA (180bp) protein (60aa)

This feature has no annotations

RTP_07252018_0_1um_scaffold_4615_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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1812..2048
DNA (237bp) protein (79aa)
Acyl carrier protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJX6_NIAKG
acyl carrier protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_4615_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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2143..3396
DNA (1254bp) protein (418aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJX5_NIAKG
3-oxoacyl-(acyl-carrier-protein) synthase 2
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_4615_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3401..4111
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037941DE
Ribonuclease III
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_4615_8
unknown

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4108..4218
DNA (111bp) protein (37aa)

This feature has no annotations

RTP_07252018_0_1um_scaffold_4615_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(4247..4648)
DNA (402bp) protein (134aa)
Methylmalonyl-CoA epimerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJX1_NIAKG
methylmalonyl-CoA epimerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_4615_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4775..5992
DNA (1218bp) protein (406aa)
cysteine desulfurase, IscS family (EC:2.8.1.7)
cysteine desulfurase n=1 Tax=Segetibacter koreensis RepID=UPI000369833A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_4615_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6111..6527
DNA (417bp) protein (139aa)
FeS cluster assembly scaffold IscU n=1 Tax=Segetibacter koreensis RepID=UPI000380C7E8
iron-sulfur cluster assembly protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_4615_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6671..6958
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036C88BE
iron-sulfur cluster assembly accessory protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 12 items

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