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RTP_07252018_0_1um_scaffold_2412

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_2412_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..634
DNA (633bp) protein (211aa)
Acriflavin resistance protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L7T5_HALH1
Metal transporter {ECO:0000313|EMBL:KIC89856.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
acriflavin resistance protein
RTP_07252018_0_1um_scaffold_2412_2
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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621..1874
DNA (1254bp) protein (418aa)
Outer membrane efflux protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L7T6_HALH1
Transporter {ECO:0000313|EMBL:KIC89857.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
outer membrane efflux protein
RTP_07252018_0_1um_scaffold_2412_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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1871..3220
DNA (1350bp) protein (450aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L7T7_HALH1
RND family efflux transporter MFP subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_2412_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3223..4431
DNA (1209bp) protein (403aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L7T8_HALH1
Copper transporter {ECO:0000313|EMBL:KIC89859.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
RND family efflux transporter MFP subunit
RTP_07252018_0_1um_scaffold_2412_5
unknown

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comp(4321..4542)
DNA (222bp) protein (74aa)

This feature has no annotations

RTP_07252018_0_1um_scaffold_2412_6
Jejuia pallidilutea, Jejuia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4616..5542)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI00037869AD
RuBisCO operon transcriptional regulator {ECO:0000313|EMBL:GAL69222.1}; TaxID=504487 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Jejuia.;" source="Jejuia pallidilutea.;"
LysR family transcriptional regulator
RTP_07252018_0_1um_scaffold_2412_7
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5613..7064
DNA (1452bp) protein (484aa)
Isocitrate dehydrogenase {ECO:0000313|EMBL:KFD38880.1}; EC=1.1.1.42 {ECO:0000313|EMBL:KFD38880.1};; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
3-isopropylmalate dehydrogenase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AFK3_IGNAJ
leuB; 3-isopropylmalate dehydrogenase
RTP_07252018_0_1um_scaffold_2412_8
unknown

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7115..7384
DNA (270bp) protein (90aa)

This feature has no annotations

RTP_07252018_0_1um_scaffold_2412_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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7496..9163
DNA (1668bp) protein (556aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B510B
ABC transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_2412_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9173..10528
DNA (1356bp) protein (452aa)
Secretion protein HlyD family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1B4_DYAFD
secretion protein HlyD family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_2412_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10515..11231
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035FF891
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 11 items

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