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RTP_07252018_0_1um_scaffold_18227

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_18227_1
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2..505)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B372DE
Contig33, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77532.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
N-acetyltransferase GCN5
RTP_07252018_0_1um_scaffold_18227_2
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(680..1174)
DNA (495bp) protein (165aa)
Hydrogenase maturation protease n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L3Z2_HALH1
hydrogenase maturation protease
Hydrogenase maturation protease {ECO:0000313|EMBL:AEE49709.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
RTP_07252018_0_1um_scaffold_18227_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1171..1896)
DNA (726bp) protein (242aa)
Ni/Fe-hydrogenase, b-type cytochrome subunit n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5G7_9SPHI
Ni/Fe-hydrogenase, b-type cytochrome subunit {ECO:0000313|EMBL:EHQ29319.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
Ni/Fe-hydrogenase, b-type cytochrome subunit
RTP_07252018_0_1um_scaffold_18227_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2022..3746)
DNA (1725bp) protein (575aa)
Nickel-dependent hydrogenase large subunit n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5G8_9SPHI
Nickel-dependent hydrogenase large subunit {ECO:0000313|EMBL:EHQ29320.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
cytochrome-c3 hydrogenase
RTP_07252018_0_1um_scaffold_18227_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3964..4677)
DNA (714bp) protein (238aa)
Hydrogenase (NiFe) small subunit HydA {ECO:0000313|EMBL:AEV97635.1}; EC=1.12.99.6 {ECO:0000313|EMBL:AEV97635.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Hydrogenase (NiFe) small subunit HydA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLP3_NIAKG
hydrogenase (NiFe) small subunit HydA
RTP_07252018_0_1um_scaffold_18227_6
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4631..5056)
DNA (426bp) protein (142aa)
Hydrogenase (NiFe) small subunit HydA n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5G9_9SPHI
Hydrogenase (NiFe) small subunit HydA {ECO:0000313|EMBL:EHQ29321.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hydrogenase (NiFe) small subunit HydA
RTP_07252018_0_1um_scaffold_18227_7
unknown

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5161..5403
DNA (243bp) protein (81aa)

This feature has no annotations

RTP_07252018_0_1um_scaffold_18227_8
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5420..5764
DNA (345bp) protein (115aa)
Hydrogenase expression/synthesis HypA n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5H0_9SPHI
Hydrogenase expression/synthesis HypA {ECO:0000313|EMBL:EHQ29322.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hydrogenase nickel incorporation protein HypA
RTP_07252018_0_1um_scaffold_18227_9
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5784..6521
DNA (738bp) protein (246aa)
Hydrogenase accessory protein HypB n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5H1_9SPHI
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:EHQ29323.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hydrogenase nickel incorporation protein HypB
Displaying 9 items

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