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RTP_07252018_0_1um_scaffold_2480_2

Organism: RTP_07252018_0_1um_Bacteroidetes_45_6

partial RP 26 / 55 BSCG 27 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(1069..2559)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma54 factor n=1 Tax=Segetibacter koreensis RepID=UPI0003668B1E similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 475.0
  • Bit_score: 771
  • Evalue 3.40e-220
RNA polymerase, sigma 54 subunit, RpoN/SigL similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 494.0
  • Bit_score: 768
  • Evalue 8.30e-220
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 496.0
  • Bit_score: 865
  • Evalue 3.20e-248

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Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1491
ATGTCTTTAGGTCAATCCTTACAGCAGAAGTTGCTGCAGAAATTGTCGCCCCAGCAGATTCAGTTAATGAAACTGCTGCAGGTGCCTACTGCCAATCTGGAAGAGCGGATCAAGGAAGAACTGGAAGAGAACCCGGCACTGGAACTGGATGAAGAAGGGCACGAAGATGAATATGGAGACGATATCCAGGACGAGTTCGATAATGCATCTGATGATGATGCAGACCTGAATGGCAGCGAAGAAGAATATGACAATGTAGACATCAGTGAATATGTGGTGGACGATGATGGCGAGATCGCAGACTATAAAATGAAGGATGATAACTATCCTGAAATGGATGATCAGAAAGTGATCCCTATTAAGGTAGAATCCAGTTTTCATGACCTGCTGCTTGACCAGTTGGGTATGCTGGAGCTGGATGAACGCAGGTATAAAATTGCGGAGCAGATAGTTGGTAGTCTGGATGATGATGGGTATCTGCGCAGAGAGTTATCGTCTATTTCGGATGATCTTGCTTTCAGGCAGAGTCTGGTGGTGGAAGAAAAAGAAATTGAAGAACTGGTGCAGCAGATACAACAATTTGATCCGCCAGGAATTTGTGCCCGCGACCTGAAAGAATGTTTGCTGCTGCAACTGAAAAGAAAACTGAACGATGGGAAAAGCGTAACACTGGCTATCCAGATCCTTAGTAAATATTTTGATGAGTTTACCAAAAAACATTACGAAAAAATTCAGCGCAGCCTGAACCTGACGGATGAGCAGATCAAAGAGGTGATCAACCAGATTATTAAACTGAACCCAAAGCCGGGTGGCAATATCGGTGAGATCAATAAGGCGGAGAGTTATATCATACCCGATTTTTTTGTATTGAATAATGCGGGTAAACTGGAGTTAACACTGAACTCAAAAAACGCCCCCGATCTGCGCATCAGCGAAGGATACCGGGATATGTTAAAAGATTACGAAAAAGGAAGTAAAAAAGATAAAAGGCAGAAAGAAGCGGTATTATTTATCAAACAGAAGATCGATTCGGCCAAATGGTTTATAGACATGATCAAACAGCGGCAGGATACCCTGATTGGTACCATGAGCGCTATCATGAAACACCAACAAGAGTTTTTTCTGACAGGTGATGAAACCACCATGCGGCCCATGATTCTGAAAGATATTGCTGAGCTTACCGGGCTGGACATCTCTACCGTAAGCCGTGTGGCCAATAGTAAATTTGTGCAGACTGAATTTGGCACTTACCGCCTGAAATTTTTCTTCAGCGAATCATTGAGTACCGATAGCGGAGAAGAAGTAAGTACCCGCGAAGTAAAGAAGATCCTGAGCGATATGATTGAAGCAGAAGACAAACGCAAACCGCTCAGCGATGAACTTCTTACAGACATGCTGCAGGAAAAGGGCTATAATATTGCACGCAGAACCGTTGCTAAATACCGTGAGCAATTAAACGTTCCGGTAGCACGTTTACGTAAGGAACTATAA
PROTEIN sequence
Length: 497
MSLGQSLQQKLLQKLSPQQIQLMKLLQVPTANLEERIKEELEENPALELDEEGHEDEYGDDIQDEFDNASDDDADLNGSEEEYDNVDISEYVVDDDGEIADYKMKDDNYPEMDDQKVIPIKVESSFHDLLLDQLGMLELDERRYKIAEQIVGSLDDDGYLRRELSSISDDLAFRQSLVVEEKEIEELVQQIQQFDPPGICARDLKECLLLQLKRKLNDGKSVTLAIQILSKYFDEFTKKHYEKIQRSLNLTDEQIKEVINQIIKLNPKPGGNIGEINKAESYIIPDFFVLNNAGKLELTLNSKNAPDLRISEGYRDMLKDYEKGSKKDKRQKEAVLFIKQKIDSAKWFIDMIKQRQDTLIGTMSAIMKHQQEFFLTGDETTMRPMILKDIAELTGLDISTVSRVANSKFVQTEFGTYRLKFFFSESLSTDSGEEVSTREVKKILSDMIEAEDKRKPLSDELLTDMLQEKGYNIARRTVAKYREQLNVPVARLRKEL*