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RTP_07252018_0_1um_scaffold_2480

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_2480_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(348..1007)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036636E8
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_2480_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1069..2559)
DNA (1491bp) protein (497aa)
RNA polymerase sigma54 factor n=1 Tax=Segetibacter koreensis RepID=UPI0003668B1E
RNA polymerase, sigma 54 subunit, RpoN/SigL
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_2480_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2655..2963
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003639A01
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_2480_4
unknown

Not on your lists

comp(2929..3411)
DNA (483bp) protein (161aa)

This feature has no annotations

RTP_07252018_0_1um_scaffold_2480_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3426..4634)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037CE48A
glutamine--scyllo-inositol transaminase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_2480_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4783..5436
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003763C39
thioredoxin
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_2480_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5514..6635
DNA (1122bp) protein (374aa)
Amidohydrolase 2 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCI0_NIAKG
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AEW02520.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
RTP_07252018_0_1um_scaffold_2480_8
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6698..7084)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00036E19A6
Contig102, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75440.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
glyoxalase/bleomycin resistance protein/dioxygenase
RTP_07252018_0_1um_scaffold_2480_9
Shewanella sp. cp20, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7132..7584)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI000380348B
Uncharacterized protein {ECO:0000313|EMBL:KIO35345.1}; TaxID=1521167 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. cp20.;"
hypothetical protein
RTP_07252018_0_1um_scaffold_2480_10
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7612..8016)
DNA (405bp) protein (135aa)
membrane protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B364EE
Membrane protein {ECO:0000313|EMBL:KIC96419.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
putative integral membrane protein
RTP_07252018_0_1um_scaffold_2480_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8229..8642
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036C821A
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_2480_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8772..10550
DNA (1779bp) protein (593aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003690C6B
beta-N-acetylhexosaminidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 12 items

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