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RTP_07252018_0_1um_scaffold_3201_8

Organism: RTP_07252018_0_1um_Bacteroidetes_45_6

partial RP 26 / 55 BSCG 27 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 6489..7838

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EB13_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 346.0
  • Bit_score: 364
  • Evalue 8.80e-98
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 346.0
  • Bit_score: 364
  • Evalue 2.50e-98
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEI49206.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 346.0
  • Bit_score: 364
  • Evalue 1.20e-97

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1350
ATGCATAGTCGAGTACTGTACGTATTTGTGTTTAGTTGTATGGGAATGCTGCTCGCTTCCTGTTCTTCCAAAAAACAAACCCAGGAAACTGTTCTGGAGAGCTTCCAGGTATTTAATCCTATTGTGATAGACACATCGTATGACAAGTCGTACGTAGCAGATATCCATTCTATGCAAAACGTTGAAATCAGGGCAAGGGTAAAAGGGTTTATTGAAAAGATTTTTGTGGATGAAGGTAAACCGGTAAAAGCGGGACAGGTACTTTTTGCCTTCAGTAACCTGATGCTGAAAGAAGAATTACTCAAAGCCAATGCACAACTGAAAAATGCTGTGGCAGAATTAAAAGTAGCAGAAGTAGAACTGAAGAACAGCCGTAACCTGGTAGAGAAAAAAGTAGTTTCAGAAACGGAACTGGAAATGGCCAAAGCCAAAAAAGAAGCGATTGAGGCAAAAATACTGGAAGCCAGGGCTGCCGTATCCATTGCAGAACTGCATATTTCTTACTCGCAGATCAAAGCACCTTTTGCCGGGGTGATTAACCGGATCCCCTATAAAGTAGGTAGTCTGGTAGATGAAGGAACCCTGCTTACCACCCTCTCTAATAACAAAGAAATGTTTGCTTATTTCAATGTATCGGAGAAAGAGTACCTGCGCTTTTCTAAATCAAATGAACTGACCAAACAGAATAATATTTCGCTGTTACTGGCAGATAACACACCTTTTAAATACAAGGGGCATATTGAAACGGCAGAAACGGAAATTGATAAGAATACCGGAAATATCGCGATCCGGGCACGTTTTGCCAACCCCGAATACCTGCTCAAACATGGTGCTACCGGCAAGATTATCCTCAATGGTGTACTGAATAATGCATTGGTGATTCCGCAGAAATCTACGTTTGAAGTGCAGGACAGGGTAAATGTGTTTGTGGTCGACAGTAAAAATATTGTAAGAACAAGACCGGTGGAAATTCTGTGGAGATTGCCACACCTGTATGTGGTGGGGTCCGGACTTACAAAGACGGAGACAGTATCAACGCGCGGCCTGTTGATCTGCGCAGCCTGCTTCCACAACTTTTACCAACCAATTAATCCATCCCATGACATCAAATTTTATACGCCGACCGATCTTATCGATTGTTATTTCGTTGCTGATTACTTTTCTCGGACTGATCTCTCTCTCGCAACTGCCGGTAACCCAGTTTCCGGATATTGCGCCGCCAGAAGTAACCGTAACCACCAAGTACACAGGTGCCAACGCAGAAACCTGCGTGAAAGCCGTAGTAACCCCGCTGGAGCGCGCCATCAATGGTGTGCCGGGCATGTCTTATATGTCGTCTGTTTCCGGTAA
PROTEIN sequence
Length: 450
MHSRVLYVFVFSCMGMLLASCSSKKQTQETVLESFQVFNPIVIDTSYDKSYVADIHSMQNVEIRARVKGFIEKIFVDEGKPVKAGQVLFAFSNLMLKEELLKANAQLKNAVAELKVAEVELKNSRNLVEKKVVSETELEMAKAKKEAIEAKILEARAAVSIAELHISYSQIKAPFAGVINRIPYKVGSLVDEGTLLTTLSNNKEMFAYFNVSEKEYLRFSKSNELTKQNNISLLLADNTPFKYKGHIETAETEIDKNTGNIAIRARFANPEYLLKHGATGKIILNGVLNNALVIPQKSTFEVQDRVNVFVVDSKNIVRTRPVEILWRLPHLYVVGSGLTKTETVSTRGLLICAACFHNFYQPINPSHDIKFYTPTDLIDCYFVADYFSRTDLSLATAGNPVSGYCAARSNRNHQVHRCQRRNLRESRSNPAGARHQWCAGHVLYVVCFR*