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RTP_07252018_0_1um_scaffold_3201_9

Organism: RTP_07252018_0_1um_Bacteroidetes_45_6

partial RP 26 / 55 BSCG 27 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 7810..10746

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter AcrB n=1 Tax=Methylobacter marinus RepID=UPI00035DDB6F similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 979.0
  • Bit_score: 1415
  • Evalue 0.0
Efflux pump membrane transporter BepE {ECO:0000313|EMBL:KHJ37028.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 978.0
  • Bit_score: 1416
  • Evalue 0.0
hydrophobe/amphiphile efflux-1 (HAE1) family transporter similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 979.0
  • Bit_score: 1392
  • Evalue 0.0

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Taxonomy

Pedobacter glucosidilyticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2937
ATGTCTTATATGTCGTCTGTTTCCGGTAACGATGGTTCCAGTGTGATCTCGATCATTTTTAAATCGGGTGTAGATCCGGAAGTGGCTTCGGTGAACGTACAGAACCGGGTATCTTCTGTGGTGGATGAATTGCCCGAAGAAGTAATCAAAGCGGGTGTAATTGTAGAAAAAGTGCAGAACAGTATGTTATTGTACCTGAACCTTCTCAGTGAAGACAGTACCATGGACGAAAAATTTCTCTACAACTATACTGATATTAATTTACTGCCTGAATTAAAAAGAATTGAAGGAGTTGGTTTTGCCGATATCATGGGATCCCGTGAATACTCTATGCGGATCTGGATGAACCCCGACAAAATGACCACCTATAATATTTCTACCGATGATGTGATCAAGGCATTGAAAGAACAGAACGTAGAAGCAGCACCGGGTAAAATAGGGGAAAGCTCGGGTAAAAGACCGGAAGCGTTACAGTATGTATTAAAGTACACAGGTAAGTTTAACACAGAGGAACAATACGAAAATATTATTCTGAAGAGTACGGTAGATGGAGAGATCATCATGTTAAAAGATGTGGCCAATGTAGAATTTGGTTCGCAGGAATATGATGTGATCTCAAAAGAAAATGGAAAACCTTCTGCCGCCATCCTGCTGAAACAAAGGCCGGGTAGTAATGCCAGCCAGGTAATTGCCAATATCAAAAGCAGGATGGAAGAACTGTCTGCCGGTTTCCCTTCCGGTATGAAGTATACCATCAGTTATGATGTATCTGCTTTTCTCGATGCTTCAATTCACGAAGTAATTAAAACCCTGATCGAGGCTTTCCTGCTGGTGGCATTGGTGGTATTTGTGTTTCTGCAGGATTTCCGCTCAACCCTGATCCCTGCTATTGCGGTACCGGTATCGCTGGTGGGTACTTTCTTTTTTATGCAGCTGTTTGGTTTTTCGATCAATATGATCACCCTGTTCGCATTGGTATTATCGATCGGGATTGTGGTAGATAATGCCATTGTGGTGATAGAAGCAGTACACTCTATCATGGAAGAAACCAATCTCGGTCCGCGAAAAGCTACCGAAAAAGCCATGCGCGAAATCAGTGGCGCCATCATTGCCATTACATTGGTTATGTCGGCGGTATTTTTGCCGGTTGCCTTTCTCGAAGGACCTACAGGTGTGTTCTACCGCCAGTTCTCCTTAACCATGGCGGTATCTATTGTGTTATCGGGTGTGGTAGCTTTAACGTTAACGCCGGCACTCTGTGCCACCCTGTTAAAAAACAAACACCAGGAGGGCGCTCATCCAAAGAAAAGCCTGTTTCAGTTTTTCTTCGATGCATTCAATAAACGATATAACGGCGTAGCTGACAAATACAAGAAACTGATCGAAGCCATTGCCAACCGGCGGGTAGTTACCTGGCTGATCATTCTGCTTTTTTGCGGATTAACCGGATTGGTAGGCAGTGTATTGCCCGGTGGTTTTATTCCCAACGAAGACCAGGCCACCATCTATGCCAATGTTACCGCACCTTCCGGCGCCACGCTGGAGCGTACCGAAAAAGTAGTGGATGCGATTCAGAAAGCCGCAGAGGCATTACCCGATGTGGCATCCGTATCTACCCTGGCCGGTTACAGTGTATTGTCTGAAGGAGTGGGCGCCACTTTCGGGATGAACCTGATCGGTTTAAAAAAATGGGACGAGCGCGAGCGGACAGATAAAGAAGTGATTGAATTACTGAAAGACAAAACCCGCCATATCAAAGATGCCCGGATCGAATTTTTTACACCACCACCGGTGCCGGGTTATGGTAACTCGAGTGGCTTTGAATTGAGGTTGTTAGATAAAACCGGTAGAGGTGATCTGAAAAAACTGGAAACGGTAGCCAATGATTTTGTACGGGAACTGAAAAAACATCCGGCTATAGGCAATTCGTTTACCACATTTGATGCCAGTTTTCCGCAATATCTCGTAAGTGTAGACAATATCAAAGCTGCACAGAAAGGCGTGATCCTCGCAGATGTATTGAATACACTGCAGGCATTTATCGGTAGTGAATATGCTACCAATTTTATCCGCTTTGGTCAATTGTACCGTGTAATGATCCAATCATCGCCCGAGTTCCGTTCAAGACCCGAAGACCTGATGCGTTTGTTTGTGAAAAACAAAATGGGTGAAATGGTACCGGTAGCTGCCTTCCTGAAAATTGAAAAAGTATATGGTCCGGAGCAGGTAACCCGTTACAATATGTATCCTTCGGCCATGGTAAACGGTGAGCCCAATCCCGGTTTCAGCAGTGGCCAGGCCATTGCTGCTATCCGCGAAGTGGCCAAGGCGAAATTACCGGCAGGTTTTGGGTACGACTGGGCAGGTTCCTCGCGCGACCAGGCCAATACGGGTAGTGAAGCCATATTGATTTTTGTGGTGAGTCTGTTGTTTGTGTATTTACTGTTATCCGCACAATACGAAAGTTTCCTGCTGCCGATGCCGGTGATCCTGTCATTACCCACGGGTGTATTCGGTGCCTTCTTTATGCTGTGGGCATTGGGTCTCGAAAACAATATCTATGCGCAGGTAGCCATGATCATGTTGATTGGATTGCTGGGTAAAAATGCGATCCTGATTGTAGAGTTTGCTTCACTGAAACACAGGGAAGGTAAAACGCCTTTGCAGGCAGCGATCGAGGGGGCGGCTTCAAGATTACGACCGATCCTTATGACATCTTTTGCCTTTATTGCCGGATTGATCCCACTGATTTTTGCGAGTGGCGCGGGAGCCATCGGAAATAAAACCATTGGTACCGCAGCAGCGGGGGGTATGTTATTCGGAACCCTGTTCGGGGTGATCGTGATACCAGGGATCTATGTGATTTTTTCGAAGGCAACGGATGCTATGAAGAAAACCAAAGGGAAGGAAGAAAAACCATTTACAGAGACAATCTAA
PROTEIN sequence
Length: 979
MSYMSSVSGNDGSSVISIIFKSGVDPEVASVNVQNRVSSVVDELPEEVIKAGVIVEKVQNSMLLYLNLLSEDSTMDEKFLYNYTDINLLPELKRIEGVGFADIMGSREYSMRIWMNPDKMTTYNISTDDVIKALKEQNVEAAPGKIGESSGKRPEALQYVLKYTGKFNTEEQYENIILKSTVDGEIIMLKDVANVEFGSQEYDVISKENGKPSAAILLKQRPGSNASQVIANIKSRMEELSAGFPSGMKYTISYDVSAFLDASIHEVIKTLIEAFLLVALVVFVFLQDFRSTLIPAIAVPVSLVGTFFFMQLFGFSINMITLFALVLSIGIVVDNAIVVIEAVHSIMEETNLGPRKATEKAMREISGAIIAITLVMSAVFLPVAFLEGPTGVFYRQFSLTMAVSIVLSGVVALTLTPALCATLLKNKHQEGAHPKKSLFQFFFDAFNKRYNGVADKYKKLIEAIANRRVVTWLIILLFCGLTGLVGSVLPGGFIPNEDQATIYANVTAPSGATLERTEKVVDAIQKAAEALPDVASVSTLAGYSVLSEGVGATFGMNLIGLKKWDERERTDKEVIELLKDKTRHIKDARIEFFTPPPVPGYGNSSGFELRLLDKTGRGDLKKLETVANDFVRELKKHPAIGNSFTTFDASFPQYLVSVDNIKAAQKGVILADVLNTLQAFIGSEYATNFIRFGQLYRVMIQSSPEFRSRPEDLMRLFVKNKMGEMVPVAAFLKIEKVYGPEQVTRYNMYPSAMVNGEPNPGFSSGQAIAAIREVAKAKLPAGFGYDWAGSSRDQANTGSEAILIFVVSLLFVYLLLSAQYESFLLPMPVILSLPTGVFGAFFMLWALGLENNIYAQVAMIMLIGLLGKNAILIVEFASLKHREGKTPLQAAIEGAASRLRPILMTSFAFIAGLIPLIFASGAGAIGNKTIGTAAAGGMLFGTLFGVIVIPGIYVIFSKATDAMKKTKGKEEKPFTETI*