ggKbase home page

RTP_07252018_0_1um_scaffold_4629_1

Organism: RTP_07252018_0_1um_Bacteroidetes_45_6

partial RP 26 / 55 BSCG 27 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(1..579)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PV32_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 192.0
  • Bit_score: 292
  • Evalue 2.40e-76
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 192.0
  • Bit_score: 292
  • Evalue 6.80e-77
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACU62941.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 192.0
  • Bit_score: 292
  • Evalue 3.30e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGAAGTTTGAAGCTGTTACCATCAAAGATATTGCCAAAGCACTGGGACTTTCCACTTCTACCGTATCACGGGCTTTGCGTGATAGTTATGAAATCAGTCCGGAAACCAAAAAGAAAGTACTGGAATATTCCGAAAAGATCAACTACCGGCCCAACCCCATTGCCTTAAGCCTGAAAGAGAAACGAAGCCGCTCTATCGGAATCATTGTGTGTGAGATTGCCAATAGTTTTTTCTCACAGACCATCAACGGAATTGAATCCATTGCCTACGATATGGGCTACAATGTGATCATCGCCCAAAGCCATGAATCATACGAAAGAGAAGTACTCAACGTTCAATACCTCGCTTCCCGTTCCATTGATGGGTTGCTGGTGTCTGTTTCATCCGAGACCAAAGATTTGGAACACCTGCGTAACCTGCACGACCGGGGTTTCCCCATTGTATTCTTTGACCGGGTAGTGGATGAAATGGAAACGCATAAAGTGATCGTTGATAATTTCAAAGGTGCTTACGAAGCTACCATTCACCTTGTACAATGTGGTTACCGACATATGGCGGCACTTGCCGGATCGGAATAC
PROTEIN sequence
Length: 193
MKFEAVTIKDIAKALGLSTSTVSRALRDSYEISPETKKKVLEYSEKINYRPNPIALSLKEKRSRSIGIIVCEIANSFFSQTINGIESIAYDMGYNVIIAQSHESYEREVLNVQYLASRSIDGLLVSVSSETKDLEHLRNLHDRGFPIVFFDRVVDEMETHKVIVDNFKGAYEATIHLVQCGYRHMAALAGSEY