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RTP_07252018_0_1um_scaffold_4629

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_4629_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1..579)
DNA (579bp) protein (193aa)
Transcriptional regulator, LacI family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PV32_CHIPD
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACU62941.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
RTP_07252018_0_1um_scaffold_4629_2
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1101..3437
DNA (2337bp) protein (779aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000362D456
glycoside hydrolase family 28
Glycoside hydrolase family 28 {ECO:0000313|EMBL:CCH01729.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
RTP_07252018_0_1um_scaffold_4629_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3443..5380
DNA (1938bp) protein (646aa)
Predicted unsaturated glucuronyl hydrolase {ECO:0000313|EMBL:CDM64162.1}; EC=3.2.1.172 {ECO:0000313|EMBL:CDM64162.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Rhamnogalacturonides degradation protein RhiN n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9H0L2_9SPHI
glycosyl hydrolase family protein
RTP_07252018_0_1um_scaffold_4629_4
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5377..6987
DNA (1611bp) protein (537aa)
pectinesterase (EC:3.1.1.11)
Pectinesterase {ECO:0000313|EMBL:AHJ97138.1}; EC=3.1.1.11 {ECO:0000313|EMBL:AHJ97138.1};; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
pectate lyase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B5FCD2
Displaying 4 items

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