ggKbase home page

RTP_07252018_0_1um_scaffold_7509_2

Organism: RTP_07252018_0_1um_Bacteroidetes_45_6

partial RP 26 / 55 BSCG 27 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 354..1190

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=2 Tax=Pedobacter arcticus RepID=UPI00036B8FA5 similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 260.0
  • Bit_score: 328
  • Evalue 4.30e-87
Marine sediment metagenome DNA, contig: S06H3_L01044 {ECO:0000313|EMBL:GAI16887.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 188.0
  • Bit_score: 302
  • Evalue 4.70e-79
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 262.0
  • Bit_score: 289
  • Evalue 6.30e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 837
TTGAAACGGGAAGCTGTTGATTATCTGGTAGAAGAAGAACAGCTAAGTAACCGCAAGGCGTGTAAACTGATAGGAATATCTCGAACTACCTGTCAGTATCAAGCAAAACCTAAAGATGATACAGAGCTTCAGATAGCACTGACAGATCTTACCACCAAACATGCAGCAATTGGTTATTGGCAGTGCTGTTACCGGTTATGGAATAAAGGCCATTGGTGGAATCATAAGAGGATCTACAGGGTTTATACCGAGATGAAGCTGAATATCCGTCGTAGGGCTAAGAAACGGCTACCAGACAGGATTAAACAACCATTAACCATACCGGAAGCACCGAATCAGGTTTGGAGTATTGATTTTATGAGTGATACACTGGTAGATGGCAGGAGATTCCGTTTATTCAATGTTTTGGACGATTTTAACCGGGAATCATTGGCAATAGAAGTCGATACCTCAATGCCATCCTTACGGGTAATACGGGTCCTAAATCGTGTCATAGCCCAGCGGGGGAAACCGGCTAACCTTCGCTCTGACAATGGCCCCGAATTTATTAGCCATATTTTGCAACAATGGTGTGAAGACAATGCAATCACGCTGCAATACATACAACCAGGCAAACCAACACAAAACGCTTACATCGAAAGAAAAAATGGAAGCATCAGAAGAGAATTGTTAAATGCCTATCTGTTCAACAGTCTGGCAGAAGTCAGGTGCCTTAGCGAAGAATGGAGGATAGATTACAACACTGAACGACCACACAAATCGCTCGGCTATCTGTCACCTTTGAACTATACGGAACAGTATTATCGAAAAATTAATAACTTAGAAAACTCTAATTAA
PROTEIN sequence
Length: 279
LKREAVDYLVEEEQLSNRKACKLIGISRTTCQYQAKPKDDTELQIALTDLTTKHAAIGYWQCCYRLWNKGHWWNHKRIYRVYTEMKLNIRRRAKKRLPDRIKQPLTIPEAPNQVWSIDFMSDTLVDGRRFRLFNVLDDFNRESLAIEVDTSMPSLRVIRVLNRVIAQRGKPANLRSDNGPEFISHILQQWCEDNAITLQYIQPGKPTQNAYIERKNGSIRRELLNAYLFNSLAEVRCLSEEWRIDYNTERPHKSLGYLSPLNYTEQYYRKINNLENSN*