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RTP_07252018_0_1um_scaffold_7509

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_7509_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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79..345
DNA (267bp) protein (89aa)
transposase n=1 Tax=Erwinia carotovora RepID=UPI0001A44A78
Transposase {ECO:0000313|EMBL:KIC92918.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
transposase
RTP_07252018_0_1um_scaffold_7509_2

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354..1190
DNA (837bp) protein (279aa)
hypothetical protein n=2 Tax=Pedobacter arcticus RepID=UPI00036B8FA5
Marine sediment metagenome DNA, contig: S06H3_L01044 {ECO:0000313|EMBL:GAI16887.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
integrase catalytic subunit
RTP_07252018_0_1um_scaffold_7509_3
unknown

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1454..1552
DNA (99bp) protein (33aa)

This feature has no annotations

RTP_07252018_0_1um_scaffold_7509_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1562..1963
DNA (402bp) protein (134aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC90813.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
RTP_07252018_0_1um_scaffold_7509_trna_1
unknown

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comp(2166..2238)
DNA (73bp)
transferRNA Phe
RTP_07252018_0_1um_scaffold_7509_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2425..3864)
DNA (1440bp) protein (480aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Asparagine--tRNA ligase n=1 Tax=Niabella soli DSM 19437 RepID=H1NTZ3_9SPHI
asparaginyl-tRNA synthetase
RTP_07252018_0_1um_scaffold_7509_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4272..5885
DNA (1614bp) protein (538aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Transcription termination factor Rho n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF35_NIAKG
transcription termination factor Rho
Displaying 7 items

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