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RTP_07252018_0_1um_scaffold_17825_6

Organism: RTP_07252018_0_1um_Bacteroidetes_45_6

partial RP 26 / 55 BSCG 27 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(3524..4090)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily id=2787234 bin=GWF2_Melioribacter_38_21 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 185.0
  • Bit_score: 211
  • Evalue 5.20e-52
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 187.0
  • Bit_score: 182
  • Evalue 9.60e-44
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 185.0
  • Bit_score: 211
  • Evalue 7.30e-52

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Taxonomy

RIFOXYC2_FULL_Ignavibacteria_38_25_curated → Ignavibacteriales → Ignavibacteria → Ignavibacteriae → Bacteria

Sequences

DNA sequence
Length: 567
ATGGCTAACAACCTGCTTAACCCGGATCAATGGGTACAACTATATGCCGATGCCTTGTATAGCTATACGCTACCGCGTGTAAATGATACTGCCGTGGCGGAAGATCTGGTACAGGAAACCTTTATCAGTGCCTGGAAAGCGCGCGATAGTTTTAAAGGGGAAGCTGCTGAAAAAAGCTGGCTTTTCTCGATCTGCAAGAACAAAATCATTGATCATTACCGGAAAAAGGCCCGGGATATTATGCAGCCCATGTCTGCCAAAGGCGTGAGCGATAGCTTTTTTGATGAAGCCGAACACTGGACAAAACAAGACCAACCGGGTGACTGGGGCATCGATCTTTCGAATACGGTTGAGAATAAAGAATTCCATTCCATATTGGCTAAATGCCGGAAAAAACTCCAGGAAATGCAGGAAGCCGCGTTTACAATGAAATACCTGGAAGATATGGATGCTGCTGACATCTGTAAGGTATTGGGCATCACTTCGTCTAATTACTGGGTGTTGATTCACCGGGCCAAATTGCAGTTGCGAACCTGTCTGGAAAAAAACTGGTTACTTATAAAATAA
PROTEIN sequence
Length: 189
MANNLLNPDQWVQLYADALYSYTLPRVNDTAVAEDLVQETFISAWKARDSFKGEAAEKSWLFSICKNKIIDHYRKKARDIMQPMSAKGVSDSFFDEAEHWTKQDQPGDWGIDLSNTVENKEFHSILAKCRKKLQEMQEAAFTMKYLEDMDAADICKVLGITSSNYWVLIHRAKLQLRTCLEKNWLLIK*