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RTP_082018_0_1um_scaffold_2629

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_082018_0_1um_scaffold_2629_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1054
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003619F60
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_2629_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1124..2356
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003823F03
glycosyltransferase family protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_082018_0_1um_scaffold_2629_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2370..2918
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037269B8
PA-phosphatase-like phosphoesterase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_082018_0_1um_scaffold_2629_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2968..3822)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000369EEFE
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_082018_0_1um_scaffold_2629_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3960..4892
DNA (933bp) protein (311aa)
sugar kinase n=1 Tax=Thiobacillus thioparus RepID=UPI000374F511
carbohydrate kinase
Carbohydrate kinase, PfkB family {ECO:0000313|EMBL:AAZ96124.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_082018_0_1um_scaffold_2629_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5089..5553
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003624E2E
outer membrane lipoprotein
Outer membrane lipoprotein, putative {ECO:0000313|EMBL:AAZ96123.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_082018_0_1um_scaffold_2629_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5658..6407
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D9E04
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_082018_0_1um_scaffold_2629_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6461..7303
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000379D83D
lyso-ornithine lipid acyltransferase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_082018_0_1um_scaffold_2629_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7239..8060)
DNA (822bp) protein (274aa)
apaH; diadenosine tetraphosphatase (EC:3.6.1.41)
biotin transporter BioY n=1 Tax=Thiobacillus denitrificans RepID=UPI00036095A7
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_082018_0_1um_scaffold_2629_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8141..8542
DNA (402bp) protein (134aa)
Glutaredoxin family protein id=1333500 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
glutaredoxin family protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_082018_0_1um_scaffold_2629_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8539..10521
DNA (1983bp) protein (661aa)
ATP-dependent DNA helicase Rep (EC:3.6.1.-)
ATP-dependent DNA helicase id=1333501 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_082018_0_1um_scaffold_2629_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10563..10868)
DNA (306bp) protein (102aa)
Cytochrome c-551 (Cytochrome c551) (Cytochrome C8) id=1333502 bin=GWE1_T_denit_62_9 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cytochrome c, class I
Tax=GWE1_Thiobacillus_62_9_curated
RTP_082018_0_1um_scaffold_2629_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11002..12069)
DNA (1068bp) protein (356aa)
cbbA; fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
fructose-bisphosphate aldolase n=1 Tax=Thiobacillus thioparus RepID=UPI00037D9D39
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_2629_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12107..13540)
DNA (1434bp) protein (478aa)
pykA; pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] id=12495890 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
pykA; pyruvate kinase (EC:2.7.1.40)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_082018_0_1um_scaffold_2629_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13668..14846)
DNA (1179bp) protein (393aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
phosphoglycerate kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00037D91A3
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_2629_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15008..15421)
DNA (414bp) protein (138aa)
cbbG; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI000366BE45
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 16 items

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