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RTP_082018_0_1um_scaffold_714

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_082018_0_1um_scaffold_714_1
unknown

Not on your lists

3..371
DNA (369bp) protein (123aa)

This feature has no annotations

RTP_082018_0_1um_scaffold_714_2
unknown

Not on your lists

comp(503..676)
DNA (174bp) protein (58aa)

This feature has no annotations

RTP_082018_0_1um_scaffold_714_3
R_Pseudomonadales_64_12, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(845..1888)
DNA (1044bp) protein (348aa)
DNA topoisomerase, type I, putative n=1 Tax=Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A) RepID=F2N3R4_PSEU6
DNA topoisomerase, type I
Tax=RIFCSPHIGHO2_01_FULL_Pseudomonadales_64_12_curated
RTP_082018_0_1um_scaffold_714_4
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(1889..2140)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TE04_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH88377.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
RTP_082018_0_1um_scaffold_714_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2377..3885
DNA (1509bp) protein (503aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A8065
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_082018_0_1um_scaffold_714_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3898..4431)
DNA (534bp) protein (178aa)
ADP-ribose pyrophosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI00036E6915
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_082018_0_1um_scaffold_714_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4600..5643
DNA (1044bp) protein (348aa)
ATPase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036482CB
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_082018_0_1um_scaffold_714_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5651..6904
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036F9D07
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_082018_0_1um_scaffold_714_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6901..7782
DNA (882bp) protein (294aa)
disulfide bond formation protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003732AA0
disulfide bond chaperone, Hsp33 family
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_082018_0_1um_scaffold_714_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7794..8087
DNA (294bp) protein (98aa)
hypothetical protein id=12496914 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_082018_0_1um_scaffold_714_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8207..9910
DNA (1704bp) protein (568aa)
General secretion pathway protein E n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJG6_9PROT
general secretion pathway protein E
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_714_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9913..11142
DNA (1230bp) protein (410aa)
MSHA biogenesis protein MshG n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D55255
Type IV pilus assembly protein tapC
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_714_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11275..11886
DNA (612bp) protein (204aa)
General secretion pathway protein H n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HP3_DECAR
general secretion pathway protein H
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_714_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11930..12415
DNA (486bp) protein (162aa)
General secretion pathway protein H n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SIZ9_GALCS
general secretion pathway protein H
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_714_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12405..12974
DNA (570bp) protein (190aa)
Putative uncharacterized protein id=1372873 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_082018_0_1um_scaffold_714_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12971..13816
DNA (846bp) protein (282aa)
Putative uncharacterized protein id=1372874 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
general secretion pathway protein H
Tax=GWE1_Thiobacillus_62_9_curated
RTP_082018_0_1um_scaffold_714_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13813..14226
DNA (414bp) protein (138aa)
hypothetical protein; K12286 MSHA biogenesis protein MshP id=12493305 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_714_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14279..15202
DNA (924bp) protein (308aa)
agglutinin biogenesis protein MshI n=1 Tax=Janthinobacterium lividum RepID=UPI00028812A6
mannose-sensitive agglutinin (MSHA) biogenesis protein MshI
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_714_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15199..15810
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKR1_THIDA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_714_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15810..16502
DNA (693bp) protein (231aa)
hypothetical protein; K12280 MSHA biogenesis protein MshJ id=12493310 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
mannose-sensitive agglutinin (MSHA)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_714_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16487..16816
DNA (330bp) protein (110aa)
Putative uncharacterized protein id=1338322 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_714_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16843..18480
DNA (1638bp) protein (546aa)
General secretion pathway protein D id=1338323 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
general secretion pathway protein D
Tax=GWE1_Thiobacillus_62_9_curated
RTP_082018_0_1um_scaffold_714_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18477..19373
DNA (897bp) protein (299aa)
Type II secretory pathway component ATPase id=1338324 bin=GWE1_T_denit_62_9 species=Aeromonas diversa genus=Aeromonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
type II secretory pathway component ATPase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_082018_0_1um_scaffold_714_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19387..20406
DNA (1020bp) protein (340aa)
TPR repeat-containing protein id=1338326 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_714_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20872..22041)
DNA (1170bp) protein (390aa)
aminotransferase (EC:2.6.1.-)
Probable aminotransferase id=1338327 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_082018_0_1um_scaffold_714_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22038..22811)
DNA (774bp) protein (258aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000372F665
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_082018_0_1um_scaffold_714_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22819..24111)
DNA (1293bp) protein (431aa)
membrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI000361C641
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_082018_0_1um_scaffold_714_28
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24210..24872
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTI7_ACCPU
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
RTP_082018_0_1um_scaffold_714_29
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24957..26789)
DNA (1833bp) protein (611aa)
GTP-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003698BC1
GTP-binding protein TypA {ECO:0000313|EMBL:AAZ96725.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
GTP-binding protein TypA
RTP_082018_0_1um_scaffold_714_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26843..28099)
DNA (1257bp) protein (419aa)
Putative uncharacterized protein id=1360192 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
Displaying items 1-30 of 43 in total

View Taxonomy