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RTP_11222018_0_1um_scaffold_2197

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_2197_1
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..328)
DNA (327bp) protein (109aa)
polyphosphate:nucleotide phosphotransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000367D6D5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN34544.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_11222018_0_1um_scaffold_2197_2
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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512..889
DNA (378bp) protein (126aa)
gloA; lactoylglutathione lyase (EC:4.4.1.5)
Lactoylglutathione lyase {ECO:0000313|EMBL:KGW11599.1}; EC=4.4.1.5 {ECO:0000313|EMBL:KGW11599.1};; TaxID=1435370 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei MSHR4000.;"
Lactoylglutathione lyase n=1 Tax=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) RepID=Q2T112_BURTA
RTP_11222018_0_1um_scaffold_2197_3
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(950..3226)
DNA (2277bp) protein (759aa)
hypothetical protein n=1 Tax=Algicola sagamiensis RepID=UPI000361C3EE
diguanylate cyclase/phosphodiesterase
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
RTP_11222018_0_1um_scaffold_2197_4
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3275..5746)
DNA (2472bp) protein (824aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00036D5A96
diguanylate cyclase with PAS/PAC sensor
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
RTP_11222018_0_1um_scaffold_2197_5
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(6031..7299)
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002DC2B2F
monooxygenase FAD-binding protein
Monooxygenase fad-binding protein {ECO:0000313|EMBL:ESA38712.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. Heron Island J.;"
RTP_11222018_0_1um_scaffold_2197_6
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7308..7442)
DNA (135bp) protein (45aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS) n=1 Tax=mine drainage metagenome RepID=E6QV78_9ZZZZ
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
RTP_11222018_0_1um_scaffold_2197_7

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comp(7445..8689)
DNA (1245bp) protein (415aa)
Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS) {ECO:0000313|EMBL:CBI11151.1}; EC=6.1.1.17 {ECO:0000313|EMBL:CBI11151.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS) n=1 Tax=mine drainage metagenome RepID=E6QV78_9ZZZZ
RTP_11222018_0_1um_scaffold_2197_8

Not on your lists

comp(8798..10267)
DNA (1470bp) protein (490aa)
Protein tldD homolog n=1 Tax=mine drainage metagenome RepID=E6QV79_9ZZZZ
Protein tldD homolog {ECO:0000313|EMBL:CBI11152.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
peptidase U62, modulator of DNA gyrase
RTP_11222018_0_1um_scaffold_2197_9
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10264..11172)
DNA (909bp) protein (303aa)
Putative Nitrilase n=1 Tax=mine drainage metagenome RepID=E6QV80_9ZZZZ
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Tax=CG_Hydro_01
RTP_11222018_0_1um_scaffold_2197_10

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comp(11165..11464)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QV81_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI11154.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
RTP_11222018_0_1um_scaffold_2197_11

Not on your lists

comp(11484..15203)
DNA (3720bp) protein (1240aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QV82_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI11155.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
Displaying 11 items

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