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RTP_11222018_0_1um_scaffold_2461

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_2461_trna_1
unknown

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comp(17..98)
DNA (82bp)
transferRNA Leu
RTP_11222018_0_1um_scaffold_2461_1

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138..2480
DNA (2343bp) protein (781aa)
RNase R, 3'-5' exoribonuclease {ECO:0000313|EMBL:CBI09324.1}; EC=3.1.13.1 {ECO:0000313|EMBL:CBI09324.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ribonuclease R (EC:3.1.13.1)
RNase R, 3'-5' exoribonuclease n=1 Tax=mine drainage metagenome RepID=E6QQ03_9ZZZZ
RTP_11222018_0_1um_scaffold_2461_2

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2490..3230
DNA (741bp) protein (247aa)
Putative tRNA guanosine-2'-O-methyltransferase {ECO:0000313|EMBL:CBI09325.1}; EC=2.1.1.34 {ECO:0000313|EMBL:CBI09325.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Putative tRNA guanosine-2'-O-methyltransferase n=1 Tax=mine drainage metagenome RepID=E6QQ04_9ZZZZ
RNA methyltransferase, TrmH family, group 3
RTP_11222018_0_1um_scaffold_2461_3

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3223..3759
DNA (537bp) protein (179aa)
Hypoxanthine phosphoribosyltransferase n=1 Tax=mine drainage metagenome RepID=E6QQ05_9ZZZZ
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CBI09326.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Phosphoribosyltransferase
RTP_11222018_0_1um_scaffold_2461_4
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

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3867..4709
DNA (843bp) protein (281aa)
Import inner membrane translocase, subunit Tim44 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAC8_NITMU
import inner membrane translocase subunit Tim44
Tax=CG_Beta_01
RTP_11222018_0_1um_scaffold_2461_5

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4807..5556
DNA (750bp) protein (250aa)
Putative 5'-methylthioadenosine phosphorylase (MTA phosphorylase) {ECO:0000313|EMBL:CBI09327.1}; EC=2.4.2.28 {ECO:0000313|EMBL:CBI09327.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
5'-methylthioadenosine phosphorylase (EC:2.4.2.1)
Putative 5'-methylthioadenosine phosphorylase (MTA phosphorylase) n=1 Tax=mine drainage metagenome RepID=E6QQ06_9ZZZZ
RTP_11222018_0_1um_scaffold_2461_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5544..6617)
DNA (1074bp) protein (358aa)
tRNA dimethylallyltransferase id=1350204 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
miaA; tRNA dimethylallyltransferase
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 7 items

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