ggKbase home page

RTP_11222018_0_1um_scaffold_5194

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_5194_1
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..294
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAB4_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN35565.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_11222018_0_1um_scaffold_5194_2

Not on your lists

294..1418
DNA (1125bp) protein (375aa)
glutamine-scyllo-inositol transaminase (EC:2.6.1.50)
Putative DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=mine drainage metagenome RepID=E6QQS7_9ZZZZ
Putative DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:CBI09598.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
RTP_11222018_0_1um_scaffold_5194_3

Not on your lists

1415..2359
DNA (945bp) protein (315aa)
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase) (Polymyxin resistance protein pmrF) {ECO:0000313|EMBL:CBI09599.1}; EC=2.7.8.- {ECO:0000313|EMBL:CBI09599.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase) (Polymyxin resistance protein pmrF) n=1 Tax=mine drainage metagenome RepID=E6QQS8_9ZZZZ
family 2 glycosyl transferase
RTP_11222018_0_1um_scaffold_5194_4

Not on your lists

2504..3508
DNA (1005bp) protein (335aa)
Putative Formyl transferase n=1 Tax=mine drainage metagenome RepID=E6QQS9_9ZZZZ
Putative Formyl transferase {ECO:0000313|EMBL:CBI09600.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
formyl transferase domain-containing protein
RTP_11222018_0_1um_scaffold_5194_5

Not on your lists

3527..4234
DNA (708bp) protein (236aa)
Fused UDP-L-Ara4N formyltransferase UDP-GlcA C-4'-decarboxylase {ECO:0000313|EMBL:CBI09601.1}; EC=4.1.1.35 {ECO:0000313|EMBL:CBI09601.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Fused UDP-L-Ara4N formyltransferase UDP-GlcA C-4'-decarboxylase n=1 Tax=mine drainage metagenome RepID=E6QQT0_9ZZZZ
putative nucleoside-diphosphate-sugar epimerase WcaG-like protein
Displaying 5 items

View Taxonomy