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RTP_11222018_0_1um_scaffold_11358

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_11358_1

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3..806
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QSG4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI10186.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_11358_2
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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946..1482
DNA (537bp) protein (179aa)
hslV; ATP-dependent protease peptidase subunit (EC:3.4.25.1)
ATP-dependent protease subunit HslV {ECO:0000255|HAMAP-Rule:MF_00248}; EC=3.4.25.2 {ECO:0000255|HAMAP-Rule:MF_00248};; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
ATP-dependent protease subunit HslV n=1 Tax=Azoarcus sp. (strain BH72) RepID=HSLV_AZOSB
RTP_11222018_0_1um_scaffold_11358_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1487..2830
DNA (1344bp) protein (448aa)
ATP-dependent protease n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00037D95C8
hslU; ATP-dependent protease ATP-binding subunit HslU
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
RTP_11222018_0_1um_scaffold_11358_4
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2889..3335
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003776F69
Peptidyl-prolyl cis-trans isomerase, EpsD family {ECO:0000313|EMBL:EUJ11310.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium 11.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_11358_5
unknown

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3295..3672
DNA (378bp) protein (126aa)

This feature has no annotations

RTP_11222018_0_1um_scaffold_11358_6
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3753..4304)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003161E3F
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
RTP_11222018_0_1um_scaffold_11358_7

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comp(4611..5468)
DNA (858bp) protein (286aa)
dTDP-4-dehydrorhamnose reductase (DTDP-4-keto-L-rhamnose reductase) (DTDP-6-deoxy-L-mannose dehydrogenase) (DTDP-L-rhamnose synthetase) {ECO:0000313|EMBL:CBI11169.1}; EC=1.1.1.133 {ECO:0000313|EMBL:CBI11169.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase (DTDP-4-keto-L-rhamnose reductase) (DTDP-6-deoxy-L-mannose dehydrogenase) (DTDP-L-rhamnose synthetase) n=1 Tax=mine drainage metagenome RepID=E6QV96_9ZZZZ
RTP_11222018_0_1um_scaffold_11358_8

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comp(5465..5698)
DNA (234bp) protein (78aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (DTDP-4-keto-6-deoxyglucose 3,5-epimerase) (DTDP-L-rhamnose synthetase) {ECO:0000313|EMBL:CBI11170.1}; EC=5.1.3.13 {ECO:0000313|EMBL:CBI11170.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase (DTDP-4-keto-6-deoxyglucose 3,5-epimerase) (DTDP-L-rhamnose synthetase) n=1 Tax=mine drainage metagenome RepID=E6QV97_9ZZZZ
Displaying 8 items

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