name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RTP_11222018_0_1um_scaffold_611_1
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(382..2130)
|
Major facilitator superfamily MFS_1 n=2 Tax=Methylovorus RepID=C6XAV3_METSD
major facilitator superfamily protein
Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
|
|
RTP_11222018_0_1um_scaffold_611_2
GWF2_Sideroxydans_59_14_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2196..5003
|
excinuclease ABC subunit A n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C4B9D
excinuclease ABC subunit A
Tax=GWF2_Sideroxydans_59_14_curated
|
|
RTP_11222018_0_1um_scaffold_611_3
R_Gammaproteobacteria_40_19, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5013..8360
|
DNA/RNA helicase, superfamily II, SNF2 family n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z4X1_9GAMM
SNF2 family DNA/RNA helicase
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_40_19_curated
|
|
RTP_11222018_0_1um_scaffold_611_4 |
Not on your lists |
comp(8444..8836)
|
50S ribosomal subunit protein L17 n=1 Tax=mine drainage metagenome RepID=E6QX44_9ZZZZ
50S ribosomal subunit protein L17 {ECO:0000313|EMBL:CBI11818.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rplQ; 50S ribosomal protein L17
|
|
RTP_11222018_0_1um_scaffold_611_5 |
Not on your lists |
comp(8858..9841)
|
RNA polymerase, alpha subunit {ECO:0000313|EMBL:CBI11817.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CBI11817.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
RNA polymerase, alpha subunit n=1 Tax=mine drainage metagenome RepID=E6QX43_9ZZZZ
rpoA; DNA-directed RNA polymerase subunit alpha
|
|
RTP_11222018_0_1um_scaffold_611_6 |
Not on your lists |
comp(9871..10500)
|
30S ribosomal subunit protein S4 n=1 Tax=mine drainage metagenome RepID=E6QX42_9ZZZZ
30S ribosomal subunit protein S4 {ECO:0000313|EMBL:CBI11816.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
30S ribosomal protein S4
|
|
RTP_11222018_0_1um_scaffold_611_7 |
Not on your lists |
comp(10515..10904)
|
30S ribosomal subunit protein S11 n=1 Tax=mine drainage metagenome RepID=E6QX41_9ZZZZ
30S ribosomal subunit protein S11 {ECO:0000313|EMBL:CBI11815.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
30S ribosomal protein S11
|
|
RTP_11222018_0_1um_scaffold_611_8 |
Not on your lists |
comp(10917..11279)
|
30S ribosomal subunit protein S13 n=1 Tax=mine drainage metagenome RepID=E6QX39_9ZZZZ
30S ribosomal subunit protein S13 {ECO:0000313|EMBL:CBI11813.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rpsM; 30S ribosomal protein S13
|
|
RTP_11222018_0_1um_scaffold_611_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11337..11450)
|
50S ribosomal protein L36 n=1 Tax=Azoarcus sp. (strain BH72) RepID=RL36_AZOSB
rpmJ; 50S ribosomal protein L36
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_11222018_0_1um_scaffold_611_10
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11489..11707)
|
Translation initiation factor IF-1 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABA2_9PROT
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
|
|
RTP_11222018_0_1um_scaffold_611_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11726..13051)
|
Protein translocase subunit SecY n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SLM9_THIDA
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_11222018_0_1um_scaffold_611_12
GWA2_Gallionellales_55_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13055..13489)
|
50S ribosomal protein L15 id=1820623 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
50S ribosomal protein L15
Tax=GWA2_Gallionellales_55_18_curated
|
|
RTP_11222018_0_1um_scaffold_611_13
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13491..13679)
|
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 id=12498461 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ribosomal protein L30
|
|
RTP_11222018_0_1um_scaffold_611_14 |
Not on your lists |
comp(13683..14192)
|
30S ribosomal subunit protein S5 n=1 Tax=mine drainage metagenome RepID=E6QX33_9ZZZZ
30S ribosomal subunit protein S5 {ECO:0000313|EMBL:CBI11807.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rpsE; 30S ribosomal protein S5
|
|
RTP_11222018_0_1um_scaffold_611_15
Chromobacterium piscinae, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14206..14559)
|
50S ribosomal protein L18 n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=RL18_LARHH
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=686831 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium piscinae.;"
rplR; 50S ribosomal protein L18
|
|
RTP_11222018_0_1um_scaffold_611_16
GWA2_Gallionellales_55_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14569..15102)
|
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 id=12498458 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
rplF; 50S ribosomal protein L6
Tax=GWA2_Gallionellales_55_18_curated
|
|
RTP_11222018_0_1um_scaffold_611_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15115..15510)
|
30S ribosomal protein S8 n=1 Tax=Thiobacillus thioparus RepID=UPI00037C5C8A
rpsH; 30S ribosomal protein S8
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_11222018_0_1um_scaffold_611_18
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15526..15831)
|
30S ribosomal protein S14 n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CP78_SIDLE
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
ribosomal protein S14
|
|
RTP_11222018_0_1um_scaffold_611_19
Kingella denitrificans, Kingella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15839..16378)
|
50S ribosomal protein L5 n=1 Tax=Aquaspirillum serpens RepID=UPI0003B50347
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=888741 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Kingella.;" source="Kingella denitrificans ATCC 33394.;"
rplE; 50S ribosomal protein L5
|
|
RTP_11222018_0_1um_scaffold_611_20
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16388..16705)
|
50S ribosomal protein L24 n=1 Tax=Methylotenera mobilis RepID=UPI0003701EF3
rplX; 50S ribosomal protein L24P
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
|
|
RTP_11222018_0_1um_scaffold_611_21
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16715..17083)
|
50S ribosomal protein L14 n=1 Tax=Leeia oryzae RepID=UPI00035F28EF
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000255|HAMAP-Rule:MF_01367}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
|
|
RTP_11222018_0_1um_scaffold_611_22
Candidatus Methylopumilus turicensis, Candidatus Methylopumilus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17218..17487)
|
30S ribosomal protein S17 n=2 Tax=Methylovorus RepID=C6X8T9_METSD
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1581680 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium MMS-10A-171.;"
|
|
RTP_11222018_0_1um_scaffold_611_23
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17484..17687)
|
50S ribosomal protein L29 n=1 Tax=Azoarcus sp. KH32C RepID=H0PUK1_9RHOO
rpmC; 50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
|
|
RTP_11222018_0_1um_scaffold_611_24
GWF2_Sideroxydans_59_14_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17689..18105)
|
50S ribosomal protein L16 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AIV7_9PROT
rplP; 50S ribosomal protein L16
Tax=GWF2_Sideroxydans_59_14_curated
|
|
RTP_11222018_0_1um_scaffold_611_25
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18089..18799)
|
30S ribosomal protein S3 n=1 Tax=Leeia oryzae RepID=UPI00037C8B93
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
|
|
RTP_11222018_0_1um_scaffold_611_26
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18809..19141)
|
50S ribosomal protein L22 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B197_9PROT
rplV; 50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
|
|
RTP_11222018_0_1um_scaffold_611_27
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19151..19426)
|
rpsS; 30S ribosomal protein S19
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 id=12495319 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Tax=GWA2_Gallionellales_59_43_curated
|
|
RTP_11222018_0_1um_scaffold_611_28
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19440..20267)
|
50S ribosomal protein L2 id=1820687 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
ribosomal protein L2
Tax=GWA2_Gallionellales_59_43_curated
|
|
RTP_11222018_0_1um_scaffold_611_29
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20277..20588)
|
50S ribosomal protein L23 n=1 Tax=Thauera terpenica 58Eu RepID=T0ASQ9_9RHOO
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
rplW; 50S ribosomal protein L23
|
|
RTP_11222018_0_1um_scaffold_611_30
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20585..21208)
|
50S ribosomal protein L4 n=1 Tax=Herminiimonas arsenicoxydans RepID=RL4_HERAR
rplD; 50S ribosomal protein L4
Tax=GWA2_Rhodocyclales_65_20_curated
|