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RTP_11222018_0_1um_scaffold_831

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_831_1

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comp(3..1550)
DNA (1548bp) protein (516aa)
Glucosephosphate isomerase {ECO:0000313|EMBL:CBI10544.1}; EC=5.3.1.9 {ECO:0000313|EMBL:CBI10544.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucosephosphate isomerase n=1 Tax=mine drainage metagenome RepID=E6QTH2_9ZZZZ
RTP_11222018_0_1um_scaffold_831_2

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1753..1989
DNA (237bp) protein (79aa)
Protein Hfq n=1 Tax=mine drainage metagenome RepID=E6QTH1_9ZZZZ
Protein Hfq {ECO:0000313|EMBL:CBI10543.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hfq; RNA-binding protein Hfq
RTP_11222018_0_1um_scaffold_831_3

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2002..3159
DNA (1158bp) protein (386aa)
GTP-binding protein HflX n=1 Tax=mine drainage metagenome RepID=E6QTH0_9ZZZZ
GTP-binding protein HflX {ECO:0000313|EMBL:CBI10542.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
GTP-binding proten HflX
RTP_11222018_0_1um_scaffold_831_4
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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3162..4337
DNA (1176bp) protein (392aa)
HflK protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AHI6_9PROT
Membrane protein {ECO:0000313|EMBL:GAO35546.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
HflK protein
RTP_11222018_0_1um_scaffold_831_5
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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4334..5206
DNA (873bp) protein (291aa)
Protein HflC n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAC3_9PROT
hypothetical protein
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_11222018_0_1um_scaffold_831_6
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

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5394..6551
DNA (1158bp) protein (386aa)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XEF7_METSD
histidyl-tRNA synthetase 2
Tax=CG_Beta_01
RTP_11222018_0_1um_scaffold_831_7

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6593..7888
DNA (1296bp) protein (432aa)
Adenylosuccinate synthetase (IMP--aspartate ligase) (AdSS) (AMPSase) {ECO:0000313|EMBL:CBI10538.1}; EC=6.3.4.4 {ECO:0000313|EMBL:CBI10538.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase (IMP--aspartate ligase) (AdSS) (AMPSase) n=1 Tax=mine drainage metagenome RepID=E6QTG6_9ZZZZ
RTP_11222018_0_1um_scaffold_831_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7937..9037)
DNA (1101bp) protein (367aa)
2-oxoglutarate dehydrogenase E2 (EC:2.3.1.61)
dihydrolipoamide succinyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003705B1C
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_11222018_0_1um_scaffold_831_9
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9034..11718)
DNA (2685bp) protein (895aa)
sucA; 2-oxoglutarate dehydrogenase E1 (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AC69_9PROT
2-oxoglutarate dehydrogenase E1 {ECO:0000313|EMBL:GAO35770.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
RTP_11222018_0_1um_scaffold_831_10

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comp(11722..13020)
DNA (1299bp) protein (433aa)
Citrate synthase {ECO:0000313|EMBL:CBI09515.1}; EC=2.3.3.1 {ECO:0000313|EMBL:CBI09515.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=mine drainage metagenome RepID=E6QQJ4_9ZZZZ
RTP_11222018_0_1um_scaffold_831_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13363..14310
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3J1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94032.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_831_12
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14327..14752
DNA (426bp) protein (142aa)
Globin n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZS7_THIK1
globin
Globin {ECO:0000313|EMBL:ADG30493.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
RTP_11222018_0_1um_scaffold_831_13
unknown

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14817..15101
DNA (285bp) protein (95aa)

This feature has no annotations

RTP_11222018_0_1um_scaffold_831_14
Alcanivorax hongdengensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15116..16864)
DNA (1749bp) protein (583aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B363D7
Uncharacterized protein {ECO:0000313|EMBL:EKF74730.1}; TaxID=1177179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax hongdengensis A-11-3.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_831_15
Burkholderia sp. KJ006, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16851..17297)
DNA (447bp) protein (149aa)
Uncharacterized protein n=2 Tax=Burkholderia RepID=A4JC01_BURVG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ85116.1}; TaxID=416344 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. KJ006.;"
Displaying 15 items

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