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RTP_11222018_0_1um_scaffold_942

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_942_1
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..926)
DNA (924bp) protein (308aa)
Protein kinase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ALM4_9PROT
protein kinase
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_11222018_0_1um_scaffold_942_2
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1522..2238
DNA (717bp) protein (239aa)
Protein serine/threonine phosphatase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACH9_9PROT
protein serine/threonine phosphatase
Tax=CG_Beta_01
RTP_11222018_0_1um_scaffold_942_3
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2246..2947
DNA (702bp) protein (234aa)
FHA domain containing protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B4T5_9PROT
FHA domain containing protein
Tax=CG_Beta_01
RTP_11222018_0_1um_scaffold_942_4
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2934..3779)
DNA (846bp) protein (282aa)
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z566_9NEIS
hypothetical protein
Tax=GWA2_Gallionellales_59_43_curated
RTP_11222018_0_1um_scaffold_942_5
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3887..5314
DNA (1428bp) protein (476aa)
sbcB; exonuclease I (EC:3.1.11.1)
Exodeoxyribonuclease I (Exonuclease I) (DNA deoxyribophosphodiesterase) (DRPase) {ECO:0000313|EMBL:CAL60786.1}; EC=3.1.11.1 {ECO:0000313|EMBL:CAL60786.1};; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
Exodeoxyribonuclease I (Exonuclease I) (DNA deoxyribophosphodiesterase) (DRPase) n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2P9_HERAR
RTP_11222018_0_1um_scaffold_942_6
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5324..6160
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00035EE07B
Ion transport 2 domain-containing protein
Tax=CG_Beta_01
RTP_11222018_0_1um_scaffold_942_7
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6102..6857)
DNA (756bp) protein (252aa)
tRNA/rRNA methyltransferase SpoU (EC:2.1.1.-)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q820P1_NITEU
Tax=BJP_IG2102_Gammaproteobacteria_62_140
RTP_11222018_0_1um_scaffold_942_8
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6854..7501)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI0003730946
multiple antibiotic resistance (MarC)-like protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
RTP_11222018_0_1um_scaffold_942_9
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7527..8924)
DNA (1398bp) protein (466aa)
Metal-dependent phosphohydrolase, HD subdomain n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47CE9_DECAR
metal-dependent phosphohydrolase
Tax=RBG_16_Gamma2_60_9_curated
RTP_11222018_0_1um_scaffold_942_10
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8949..10313)
DNA (1365bp) protein (455aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
Cysteine--tRNA ligase n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X9V0_METSD
RTP_11222018_0_1um_scaffold_942_11
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10405..11319
DNA (915bp) protein (305aa)
TPR repeat-containing protein id=12497926 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RBG_16_Betaproteobacteria_56_24_curated
RTP_11222018_0_1um_scaffold_942_12
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11446..11937
DNA (492bp) protein (164aa)
peptidyl-prolyl cis-trans isomerase B (EC:5.2.1.8)
cyclophilin n=1 Tax=Thiobacillus thioparus RepID=UPI0003604044
Tax=BJP_S1_SUB10_Methylophilales_55_32
RTP_11222018_0_1um_scaffold_942_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11943..12680
DNA (738bp) protein (246aa)
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJN6_9PROT
UDP-2,3-diacylglucosamine hydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
RTP_11222018_0_1um_scaffold_942_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12626..13312)
DNA (687bp) protein (229aa)
Putative uncharacterized protein id=1329863 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_11222018_0_1um_scaffold_942_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13302..14480)
DNA (1179bp) protein (393aa)
O-succinylhomoserine sulfhydrylase id=1329864 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
O-succinylhomoserine sulfhydrylase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_11222018_0_1um_scaffold_942_16
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14633..16150)
DNA (1518bp) protein (506aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHM5_THIDA
RTP_11222018_0_1um_scaffold_942_17
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16160..16648)
DNA (489bp) protein (163aa)
Colicin V production protein n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H0M6_METFK
colicin V production protein
Tax=GWA2_Rhodocyclales_65_20_curated
RTP_11222018_0_1um_scaffold_942_18
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16648..16935)
DNA (288bp) protein (96aa)
Sporulation related protein n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RSZ6_COMTE
Sporulation related protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
RTP_11222018_0_1um_scaffold_942_19
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16886..17362)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI00036BF22B
hypothetical protein
Tax=RBG_16_Gallionellales_57_15_curated
Displaying 19 items

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