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RTP_11222018_0_1um_scaffold_4152

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_4152_1

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3..611
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QQV7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI09628.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_4152_2

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625..1221
DNA (597bp) protein (199aa)
Riboflavin synthase alpha chain {ECO:0000313|EMBL:CBI09627.1}; EC=2.5.1.9 {ECO:0000313|EMBL:CBI09627.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase alpha chain n=1 Tax=mine drainage metagenome RepID=E6QQV6_9ZZZZ
RTP_11222018_0_1um_scaffold_4152_3

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1218..2306
DNA (1089bp) protein (363aa)
Riboflavin biosynthesis protein ribAB {ECO:0000313|EMBL:CBI09626.1}; EC=3.5.4.25 {ECO:0000313|EMBL:CBI09626.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein (EC:3.5.4.25 4.1.2.-)
Riboflavin biosynthesis protein ribAB n=1 Tax=mine drainage metagenome RepID=E6QQV5_9ZZZZ
RTP_11222018_0_1um_scaffold_4152_4

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2318..2785
DNA (468bp) protein (156aa)
6,7-dimethyl-8-ribityllumazine synthase (Lumazine synthase)(Riboflavin synthase beta chain) {ECO:0000313|EMBL:CBI09625.1}; EC=2.5.1.9 {ECO:0000313|EMBL:CBI09625.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase (Lumazine synthase)(Riboflavin synthase beta chain) n=1 Tax=mine drainage metagenome RepID=E6QQV4_9ZZZZ
RTP_11222018_0_1um_scaffold_4152_5

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2782..3219
DNA (438bp) protein (146aa)
N utilization substance protein B homolog (Protein NusB) n=1 Tax=mine drainage metagenome RepID=E6QQV3_9ZZZZ
N utilization substance protein B homolog (Protein NusB) {ECO:0000313|EMBL:CBI09624.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
NusB antitermination factor
RTP_11222018_0_1um_scaffold_4152_6
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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3206..4183
DNA (978bp) protein (326aa)
thiamine-monophosphate kinase (EC:2.7.4.16)
thiamine monophosphate kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00036A94A0
Tax=GWA2_Gallionellales_60_142_curated
RTP_11222018_0_1um_scaffold_4152_7
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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4173..4652
DNA (480bp) protein (160aa)
phosphatidylglycerophosphatase (EC:3.1.3.27)
Phosphatidylglycerophosphatase A {ECO:0000256|PIRNR:PIRNR006162}; EC=3.1.3.27 {ECO:0000256|PIRNR:PIRNR006162};; Phosphatidylglycerolphosphate phosphatase A {ECO:0000256|PIRNR:PIRNR006162}; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
Phosphatidylglycerophosphatase n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DL73_METS0
RTP_11222018_0_1um_scaffold_4152_8

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4649..4951
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QQV0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI09621.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
CinA domain-containing protein
RTP_11222018_0_1um_scaffold_4152_9

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5310..5657
DNA (348bp) protein (116aa)
DNA polymerase, beta domain protein region n=1 Tax=mine drainage metagenome RepID=E6QQF0_9ZZZZ
DNA polymerase, beta domain protein region {ECO:0000313|EMBL:CBI09471.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
DNA polymerase subunit beta
RTP_11222018_0_1um_scaffold_4152_10
unknown

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5644..5718
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 10 items

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