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RTP_11222018_0_1um_scaffold_4251

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_4251_1
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..854
DNA (852bp) protein (284aa)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
cheR1; chemotaxis protein CheR (EC:2.1.1.80)
Chemotaxis protein methyltransferase n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1W0H7_9BURK
RTP_11222018_0_1um_scaffold_4251_2
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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851..1444
DNA (594bp) protein (198aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
chemotaxis protein CheD n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003469B4E
cheD family protein
RTP_11222018_0_1um_scaffold_4251_3
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1462..2526
DNA (1065bp) protein (355aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
chemotaxis-specific methylesterase (EC:3.1.1.61)
chemotaxis protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035F4219
RTP_11222018_0_1um_scaffold_4251_4

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2555..2944
DNA (390bp) protein (130aa)
Chemotaxis protein CheY n=1 Tax=mine drainage metagenome RepID=E6QR51_9ZZZZ
Chemotaxis protein CheY {ECO:0000313|EMBL:CBI09722.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
cheY; chemotaxis protein CheY
RTP_11222018_0_1um_scaffold_4251_5

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2960..3622
DNA (663bp) protein (221aa)
Chemotaxis protein CheZ n=1 Tax=mine drainage metagenome RepID=E6QR52_9ZZZZ
Chemotaxis protein CheZ {ECO:0000313|EMBL:CBI09723.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
chemotaxis regulator CheZ
RTP_11222018_0_1um_scaffold_4251_6
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3630..4844
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035EDA13
Uncharacterized protein {ECO:0000313|EMBL:EKU82360.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_4251_7
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4852..6540)
DNA (1689bp) protein (563aa)
single-stranded DNA exonuclease n=1 Tax=beta proteobacterium L13 RepID=UPI00036A6541
single-stranded-DNA-specific exonuclease RecJ
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:BAN35633.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_11222018_0_1um_scaffold_4251_8
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6537..6908)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEF5_GEOUR
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_11222018_0_1um_scaffold_4251_9
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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6947..7564
DNA (618bp) protein (206aa)
Alpha-ribazole phosphatase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B5P0_9PROT
alpha-ribazole phosphatase
Alpha-ribazole phosphatase {ECO:0000313|EMBL:BAN35857.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_11222018_0_1um_scaffold_4251_10
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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7608..8978
DNA (1371bp) protein (457aa)
Diguanylate phosphodiesterase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAN7_9PROT
diguanylate phosphodiesterase
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_11222018_0_1um_scaffold_4251_11
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8941..9474)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Ralstonia syzygii R24 RepID=G3A849_9RALS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJW44935.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
Displaying 11 items

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