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RTP_11222018_0_1um_scaffold_4475

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_4475_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..511)
DNA (510bp) protein (170aa)
Uncharacterized protein n=2 Tax=Acidithiobacillus caldus RepID=C6NS48_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
RTP_11222018_0_1um_scaffold_4475_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(486..1535)
DNA (1050bp) protein (350aa)
CoB--CoM heterodisulfide reductase subunit A (EC:1.8.98.1)
pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624CB1
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
RTP_11222018_0_1um_scaffold_4475_3
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1614..2723)
DNA (1110bp) protein (370aa)
heterodisulfide reductase subunit B n=1 Tax=Thioalkalivibrio RepID=UPI000381261C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL73295.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
RTP_11222018_0_1um_scaffold_4475_4
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2765..3448)
DNA (684bp) protein (228aa)
Heterodisulfide reductase, subunit C n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G5U0_9GAMM
Heterodisulfide reductase, subunit C {ECO:0000313|EMBL:EHQ53177.1}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_4475_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3685..4194)
DNA (510bp) protein (170aa)
NADH dehydrogenase n=1 Tax=Thiobacillus denitrificans RepID=UPI000370D902
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_11222018_0_1um_scaffold_4475_6
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4257..4484)
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SL89_THIDA
hypothetical protein
Tax=CG_Hydro_01
RTP_11222018_0_1um_scaffold_4475_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4640..5572)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000370F72C
DMSO reductase subunit C
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_11222018_0_1um_scaffold_4475_8
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5610..6305)
DNA (696bp) protein (232aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JPZ3_9GAMM
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:CDQ10001.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
RTP_11222018_0_1um_scaffold_4475_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6323..9202)
DNA (2880bp) protein (960aa)
formate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00037EACDD
DMSO reductase chain A {ECO:0000313|EMBL:AAZ96523.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
DMSO reductase subunit A
RTP_11222018_0_1um_scaffold_4475_10

Not on your lists

9515..9820
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QRF9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI09831.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_4475_11

Not on your lists

10016..11161
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QRF8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI09830.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_4475_12
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11245..12129
DNA (885bp) protein (295aa)
type II secretory protein GspE n=1 Tax=Thiobacillus thioparus RepID=UPI00036CA70B
type IV pilus assembly protein, PilB
Type IV pilus assembly protein, PilB {ECO:0000313|EMBL:BAN36272.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Displaying 12 items

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