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RTP_11222018_0_1um_scaffold_4605

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_4605_trna_1
unknown

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98..180
DNA (83bp)
transferRNA Leu
RTP_11222018_0_1um_scaffold_4605_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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342..698
DNA (357bp) protein (119aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
NADH-quinone oxidoreductase subunit A n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJW5_9PROT
NAD(P)H-quinone oxidoreductase subunit 3
RTP_11222018_0_1um_scaffold_4605_2
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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689..1165
DNA (477bp) protein (159aa)
NADH dehydrogenase subunit B (EC:1.6.5.3)
NADH dehydrogenase subunit B n=1 Tax=beta proteobacterium L13 RepID=UPI00036C9DCD
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
RTP_11222018_0_1um_scaffold_4605_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1185..1784
DNA (600bp) protein (200aa)
nuoC; NADH dehydrogenase subunit C (EC:1.6.5.3); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] id=12494876 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
NADH dehydrogenase subunit C (EC:1.6.5.3)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_11222018_0_1um_scaffold_4605_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1784..3037
DNA (1254bp) protein (418aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
NADH dehydrogenase subunit D (EC:1.6.99.3)
NADH-quinone oxidoreductase subunit D n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJZ3_9PROT
RTP_11222018_0_1um_scaffold_4605_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3037..3510
DNA (474bp) protein (158aa)
nuoE; NADH dehydrogenase subunit E (EC:1.6.5.3); K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] id=12494878 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
nuoE; NADH dehydrogenase subunit E (EC:1.6.5.3)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_11222018_0_1um_scaffold_4605_6
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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3512..4591
DNA (1080bp) protein (360aa)
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit F n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJR4_9PROT
Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
Displaying 7 items

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