ggKbase home page

RTP_11222018_0_1um_scaffold_4803

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_4803_1
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..297)
DNA (297bp) protein (99aa)
Putative HTH-type transcriptional regulator n=1 Tax=Osedax symbiont Rs2 RepID=S6HZV2_9GAMM
Putative HTH-type transcriptional regulator {ECO:0000313|EMBL:EPJ53084.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs2.;"
MarR family transcriptional regulator
RTP_11222018_0_1um_scaffold_4803_2
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

382..774
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GP58_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPJ53083.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs2.;"
RTP_11222018_0_1um_scaffold_4803_3
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

771..1448
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GN10_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPJ53082.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs2.;"
ubiquinone/menaquinone biosynthesis methyltransferase
RTP_11222018_0_1um_scaffold_4803_4
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1659..2420
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMX8_AZOSU
hypothetical protein
Tax=GWA2_Gallionellales_60_142_curated
RTP_11222018_0_1um_scaffold_4803_5
Burkholderiaceae bacterium 26, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2505..2894
DNA (390bp) protein (130aa)
Peptidase C13, legumain asparaginyl peptidase n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A4K4_METMM
Uncharacterized protein {ECO:0000313|EMBL:KJK03864.1}; TaxID=1619951 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 26.;"
peptidase C13, legumain asparaginyl peptidase
RTP_11222018_0_1um_scaffold_4803_6
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3079..4197)
DNA (1119bp) protein (373aa)
ABC-type branched-chain amino acid transport systems, periplasmic component n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6T0E4_JANMA
branched-chain amino acid ABC transporter periplasmic protein
ABC-type branched-chain amino acid transport systems, periplasmic component {ECO:0000313|EMBL:ABR90240.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
RTP_11222018_0_1um_scaffold_4803_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4319..4471
DNA (153bp) protein (51aa)
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase (EC:2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000255|HAMAP-Rule:MF_01106}; Includes:; Glutamate N-acetyltransferase {ECO:0000255|HAMAP-Rule:MF_01106}; EC=2.3.1.35 {ECO:0000255|HAMAP-Rule:MF_01106};; Ornithine acetyltransferase {ECO:0000255|HAMAP-Rule:MF_01106}; Short=OATase {ECO:0000255|HAMAP-Rule:MF_01106};; Ornithine transacetylase {ECO:0000255|HAMAP-Rule:MF_01106}; Includes:; Amino-acid acetyltransferase {ECO:0000255|HAMAP-Rule:MF_01106}; EC=2.3.1.1 {ECO:0000255|HAMAP-Rule:MF_01106};; N-acetylglutamate synthase {ECO:0000255|HAMAP-Rule:MF_01106}; Short=AGSase {ECO:0000255|HAMAP-Rule:MF_01106};; Contains:; Arginine biosynthesis bifunctional protein ArgJ alpha chain {ECO:0000255|HAMAP-Rule:MF_01106}; Contains:; Arginine biosynthesis bifunctional protein ArgJ beta chain {ECO:0000255|HAMAP-Rule:MF_01106}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
N-acetylglutamate synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036EFAF3
Displaying 7 items

View Taxonomy