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RTP_11222018_0_1um_scaffold_1086

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_1086_1

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comp(2..520)
DNA (519bp) protein (173aa)
Putative Peptidase, M50 family n=1 Tax=mine drainage metagenome RepID=E6QS69_9ZZZZ
Putative Peptidase, M50 family {ECO:0000313|EMBL:CBI10091.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
integral membrane transmembrane protein
RTP_11222018_0_1um_scaffold_1086_2

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comp(521..1147)
DNA (627bp) protein (209aa)
Putative translation factor (SUA5) n=1 Tax=mine drainage metagenome RepID=E6QS68_9ZZZZ
Putative translation factor (SUA5) {ECO:0000313|EMBL:CBI10090.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Sua5/YciO/YrdC/YwlC
RTP_11222018_0_1um_scaffold_1086_3
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1147..2001)
DNA (855bp) protein (285aa)
Putative Phosphoesterase PHP family n=1 Tax=mine drainage metagenome RepID=E6QS67_9ZZZZ
php domain-containing protein
Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
RTP_11222018_0_1um_scaffold_1086_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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2059..2793
DNA (735bp) protein (245aa)
Uncharacterized protein n=2 Tax=Acidithiobacillus caldus RepID=C6NYK7_9GAMM
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RTP_11222018_0_1um_scaffold_1086_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2796..3332
DNA (537bp) protein (179aa)
Probable intracellular septation protein A n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5W7Z9_BURSC
intracellular septation protein A
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
RTP_11222018_0_1um_scaffold_1086_6
Alcanivorax sp. DG881, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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3329..3637
DNA (309bp) protein (103aa)
YCII-related domain superfamily n=1 Tax=Alcanivorax sp. DG881 RepID=B4X1S6_9GAMM
YCII-related domain superfamily {ECO:0000313|EMBL:EDX91131.1}; TaxID=236097 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. DG881.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_1086_7
Aquitalea magnusonii, Aquitalea, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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3634..3897
DNA (264bp) protein (88aa)
Putative stress-induced morphogen BolA protein n=1 Tax=mine drainage metagenome RepID=E6QS64_9ZZZZ
BolA family protein {ECO:0000313|EMBL:KJV33435.1}; TaxID=332411 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_1086_8

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3922..4770
DNA (849bp) protein (283aa)
Putative PpiC-type peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:CBI10085.1}; EC=5.2.1.8 {ECO:0000313|EMBL:CBI10085.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Putative PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=mine drainage metagenome RepID=E6QS63_9ZZZZ
PpiC-type peptidyl-prolyl cis-trans isomerase
RTP_11222018_0_1um_scaffold_1086_9

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4843..5067
DNA (225bp) protein (75aa)
Protein Hfq n=1 Tax=mine drainage metagenome RepID=E6QS62_9ZZZZ
Protein Hfq {ECO:0000313|EMBL:CBI10084.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
RNA-binding protein Hfq
RTP_11222018_0_1um_scaffold_1086_10
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5091..7730)
DNA (2640bp) protein (880aa)
Aminopeptidase N (Alpha-aminoacylpeptide hydrolase) {ECO:0000313|EMBL:CAL60776.1}; EC=3.4.11.2 {ECO:0000313|EMBL:CAL60776.1};; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
pepN; aminopeptidase (EC:3.4.11.2)
aminopeptidase N n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000381578E
RTP_11222018_0_1um_scaffold_1086_11

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comp(7740..9725)
DNA (1986bp) protein (662aa)
peptide ABC transporter ATPase (EC:3.6.3.24 3.6.3.31)
Putative peptide transport fused subunits of ABC superfamily: ATP-binding components n=1 Tax=mine drainage metagenome RepID=E6QRW8_9ZZZZ
Putative peptide transport fused subunits of ABC superfamily: ATP-binding components {ECO:0000313|EMBL:CBI09990.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
RTP_11222018_0_1um_scaffold_1086_12
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9725..11104)
DNA (1380bp) protein (460aa)
Binding-protein dependent transport system inner membrane protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AG83_9PROT
binding-protein dependent transport system inner membrane protein
Binding-protein dependent transport system inner membrane protein {ECO:0000313|EMBL:BAN34996.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_11222018_0_1um_scaffold_1086_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11101..12078)
DNA (978bp) protein (326aa)
Oligopeptide ABC transporter permease protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIA5_THIDA
oligopeptide ABC transporter permease
Oligopeptide ABC transporter permease protein {ECO:0000313|EMBL:AAZ97623.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_11222018_0_1um_scaffold_1086_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12075..13724)
DNA (1650bp) protein (550aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037035E4
oligopeptide ABC transporter periplasmic protein
Oligopeptide ABC transporter periplasmic component {ECO:0000313|EMBL:AAZ97624.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying 14 items

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