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RTP_11222018_0_1um_scaffold_1161

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_1161_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3..320
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHN4_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97852.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_11222018_0_1um_scaffold_1161_2
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

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322..825
DNA (504bp) protein (168aa)
ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. WS RepID=UPI0003781AE5
putative ABC transporter, periplasmic component YrbD
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
RTP_11222018_0_1um_scaffold_1161_3

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822..2174
DNA (1353bp) protein (451aa)
Putative Outer membrane protein n=1 Tax=mine drainage metagenome RepID=E6QQQ3_9ZZZZ
Putative Outer membrane protein {ECO:0000313|EMBL:CBI09574.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
outer membrane protein
RTP_11222018_0_1um_scaffold_1161_4

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2198..2821
DNA (624bp) protein (208aa)
Toluene tolerance protein n=1 Tax=mine drainage metagenome RepID=E6QQQ4_9ZZZZ
Toluene tolerance protein {ECO:0000313|EMBL:CBI09575.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
signal peptide protein
RTP_11222018_0_1um_scaffold_1161_5
RIFOXYB12_FULL_Gallionellales_54_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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2827..3093
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) RepID=C6WSX2_METML
hypothetical protein
Tax=RIFOXYB12_FULL_Gallionellales_54_9_curated
RTP_11222018_0_1um_scaffold_1161_6

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3099..3998
DNA (900bp) protein (300aa)
Putative ABCtransporter, ATPase component,sulfate-transporting {ECO:0000313|EMBL:CBI09577.1}; EC=3.6.3.25 {ECO:0000313|EMBL:CBI09577.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Putative ABCtransporter, ATPase component,sulfate-transporting n=1 Tax=mine drainage metagenome RepID=E6QQQ6_9ZZZZ
ABC transporter-like protein
RTP_11222018_0_1um_scaffold_1161_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3995..4750
DNA (756bp) protein (252aa)
Metal-dependent hydrolase n=2 Tax=Pandoraea RepID=V5UDW0_9BURK
metal-dependent hydrolase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_11222018_0_1um_scaffold_1161_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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4763..5005
DNA (243bp) protein (81aa)
BolA-like protein n=1 Tax=mine drainage metagenome RepID=T0Z7J6_9ZZZZ
BolA-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
RTP_11222018_0_1um_scaffold_1161_9

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5008..6261
DNA (1254bp) protein (418aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT) {ECO:0000313|EMBL:CBI09580.1}; EC=2.5.1.7 {ECO:0000313|EMBL:CBI09580.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT) n=1 Tax=mine drainage metagenome RepID=E6QQQ9_9ZZZZ
RTP_11222018_0_1um_scaffold_1161_10
GWF2_Sideroxydans_59_14_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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6271..6906
DNA (636bp) protein (212aa)
ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase (ATP-PRTase) (ATP-PRT) n=1 Tax=mine drainage metagenome RepID=E6QQR0_9ZZZZ
Tax=GWF2_Sideroxydans_59_14_curated
RTP_11222018_0_1um_scaffold_1161_11

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6910..7998
DNA (1089bp) protein (363aa)
Heptosyltransferase family protein n=1 Tax=mine drainage metagenome RepID=E6QQR1_9ZZZZ
Heptosyltransferase family protein {ECO:0000313|EMBL:CBI09582.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
heptosyltransferase
RTP_11222018_0_1um_scaffold_1161_12

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comp(7974..8789)
DNA (816bp) protein (272aa)
Putative lipopolysaccharide core biosynthesis glycosyl transferase LpsC {ECO:0000313|EMBL:CBI09583.1}; EC=2.-.-.- {ECO:0000313|EMBL:CBI09583.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Putative lipopolysaccharide core biosynthesis glycosyl transferase LpsC n=1 Tax=mine drainage metagenome RepID=E6QQR2_9ZZZZ
lipopolysaccharide core biosynthesis glycosyl transferase (KdtX)
RTP_11222018_0_1um_scaffold_1161_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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8866..9915
DNA (1050bp) protein (350aa)
Glycosyl transferase group 1 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KW43_HALNC
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACX96946.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
RTP_11222018_0_1um_scaffold_1161_14
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9904..11175)
DNA (1272bp) protein (424aa)
Putative uncharacterized protein id=1345549 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_51_14_curated
RTP_11222018_0_1um_scaffold_1161_15
Bacillus sp. L_1B0_5, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(11190..12179)
DNA (990bp) protein (330aa)
Uncharacterized protein n=5 Tax=Bacillus cereus RepID=R8DMD2_BACCE
Contig70, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ84186.1}; TaxID=1586646 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. L_1B0_5.;"
RTP_11222018_0_1um_scaffold_1161_16
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(12176..13006)
DNA (831bp) protein (277aa)
Putative glycosyltransferase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum RepID=Q6TFB6_THETR
Putative glycosyltransferase {ECO:0000313|EMBL:AAR85516.1}; TaxID=1517 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium thermosaccharolyticum (Clostridium; thermosaccharolyticum).;"
family 2 glycosyl transferase
Displaying 16 items

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