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RTP_11222018_0_1um_scaffold_1229

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_1229_1
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..925
DNA (924bp) protein (308aa)
Thymidine phosphorylase n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1W488_9BURK
Thymidine phosphorylase {ECO:0000313|EMBL:EGF30332.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_1229_2
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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926..1573
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B6P5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAO37013.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_1229_3

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1582..2820
DNA (1239bp) protein (413aa)
Malate dehydrogenase (Oxaloacetate decarboxylating) (NADP+) {ECO:0000313|EMBL:CBI10579.1}; EC=1.1.1.40 {ECO:0000313|EMBL:CBI10579.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (EC:1.1.1.40)
Malate dehydrogenase (Oxaloacetate decarboxylating) (NADP+) n=1 Tax=mine drainage metagenome RepID=E6QTK7_9ZZZZ
RTP_11222018_0_1um_scaffold_1229_4
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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2829..5501
DNA (2673bp) protein (891aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AM22_9PROT
glutamate-ammonia-ligase adenylyltransferase
RTP_11222018_0_1um_scaffold_1229_5
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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5549..6469
DNA (921bp) protein (307aa)
Branched-chain amino acid aminotransferase n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DL48_METS0
branched-chain amino acid aminotransferase
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:ADI30519.1}; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
RTP_11222018_0_1um_scaffold_1229_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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6479..6679
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00036690EC
Uncharacterized protein {ECO:0000313|EMBL:CCU62327.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_1229_7
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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6760..7632
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H3D9_METFK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE48998.1}; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
RTP_11222018_0_1um_scaffold_1229_8
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

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7655..8092
DNA (438bp) protein (146aa)
hypothetical protein; K09004 hypothetical protein id=12495897 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=CG_Beta_01
RTP_11222018_0_1um_scaffold_1229_9

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comp(8106..8966)
DNA (861bp) protein (287aa)
Formyltetrahydrofolate hydrolase {ECO:0000313|EMBL:CBI11165.1}; EC=3.5.1.10 {ECO:0000313|EMBL:CBI11165.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
formyltetrahydrofolate deformylase (EC:3.5.1.10)
Formyltetrahydrofolate hydrolase n=1 Tax=mine drainage metagenome RepID=E6QV92_9ZZZZ
RTP_11222018_0_1um_scaffold_1229_10

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9235..12105
DNA (2871bp) protein (957aa)
Putative Ribonucleoside-diphosphate reductase (Ribonucleoside diphosphate reductase, alpha subunit) (Ribonucleotide reductase large subunit) {ECO:0000313|EMBL:CBI11166.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CBI11166.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Putative Ribonucleoside-diphosphate reductase (Ribonucleoside diphosphate reductase, alpha subunit) (Ribonucleotide reductase large subunit) n=1 Tax=mine drainage metagenome RepID=E6QV93_9ZZZZ
RTP_11222018_0_1um_scaffold_1229_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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12135..12500
DNA (366bp) protein (122aa)
ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1); K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] id=12496835 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 11 items

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