ggKbase home page

RTP_11222018_0_1um_scaffold_1336

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_1336_1

Not on your lists

1..186
DNA (186bp) protein (62aa)
Microcompartments protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1D6I9_9ZZZZ
Microcompartments protein {ECO:0000313|EMBL:EQD77900.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
microcompartments protein
RTP_11222018_0_1um_scaffold_1336_2

Not on your lists

218..661
DNA (444bp) protein (148aa)
Putative Bacterioferritin (Cytochrome b1) n=1 Tax=mine drainage metagenome RepID=E6PLT1_9ZZZZ
Putative Bacterioferritin (Cytochrome b1) {ECO:0000313|EMBL:CBH95882.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ferritin Dps family protein
RTP_11222018_0_1um_scaffold_1336_3
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

658..936
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=root RepID=E6QCF3_9ZZZZ
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEM49204.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
RTP_11222018_0_1um_scaffold_1336_4

Not on your lists

995..1630
DNA (636bp) protein (212aa)
Cobyrinic acid a,c-diamide synthase n=1 Tax=mine drainage metagenome RepID=E6PLT3_9ZZZZ
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:CBH95884.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
cobyrinic acid ac-diamide synthase
RTP_11222018_0_1um_scaffold_1336_5
unknown

Not on your lists

1621..1914
DNA (294bp) protein (98aa)

This feature has no annotations

RTP_11222018_0_1um_scaffold_1336_6

Not on your lists

2046..2849
DNA (804bp) protein (268aa)
Post-translational RubisCO activator CbbQ (Belongs to cbbQ/nirQ/norQ/gpvN family) n=1 Tax=mine drainage metagenome RepID=E6PLT5_9ZZZZ
Post-translational RubisCO activator CbbQ (Belongs to cbbQ/nirQ/norQ/gpvN family) {ECO:0000313|EMBL:CBH95886.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
CbbQ/NirQ/NorQ domain-containing protein
RTP_11222018_0_1um_scaffold_1336_7

Not on your lists

2982..5333
DNA (2352bp) protein (784aa)
Rubisco activation protein CbbO n=1 Tax=mine drainage metagenome RepID=E6PLT6_9ZZZZ
Rubisco activation protein CbbO {ECO:0000313|EMBL:CBH95887.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
von Willebrand factor type A domain-containing protein
RTP_11222018_0_1um_scaffold_1336_8
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5330..7417
DNA (2088bp) protein (696aa)
Sulfate transporter n=1 Tax=Thiocapsa marina 5811 RepID=F9UF60_9GAMM
Sulfate transporter {ECO:0000313|EMBL:EGV17097.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
high affinity sulfate transporter SulP
RTP_11222018_0_1um_scaffold_1336_9
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7583..8650)
DNA (1068bp) protein (356aa)
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=ANMK_NITMU
anmK; anhydro-N-acetylmuramic acid kinase
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
RTP_11222018_0_1um_scaffold_1336_10
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8690..10015)
DNA (1326bp) protein (442aa)
Peptidase M23 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B7A1_9PROT
peptidase M23
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_11222018_0_1um_scaffold_1336_11
GWA2_Gallionellales_55_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10124..11359
DNA (1236bp) protein (412aa)
Tyrosine--tRNA ligase n=2 Tax=Methylovorus RepID=E4QNU6_METS6
tyrS; tyrosyl-tRNA synthetase
Tax=GWA2_Gallionellales_55_18_curated
Displaying 11 items

View Taxonomy