ggKbase home page

RTP_11222018_0_1um_scaffold_1706

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_1706_1
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117..425
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Methylophilus methylotrophus RepID=UPI00037C4B7A
putative nucleotidyltransferase
Tax=BJP_IG2103_Dechloromonas_63_51
RTP_11222018_0_1um_scaffold_1706_2
BJP_08E140C01_10KDA_Methylophilales_47_88, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

422..808
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Methylophilus methylotrophus RepID=UPI0003695E78
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methylophilales_47_88
RTP_11222018_0_1um_scaffold_1706_3
BJP_08E140C01_10KDA_Methylophilales_47_88, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

808..2148
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0003042665
tnpA; transposase TnpA, ISL3 family
Tax=BJP_08E140C01_10KDA_Methylophilales_47_88
RTP_11222018_0_1um_scaffold_1706_4
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2281..2676)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DJI5_METS0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI30220.1}; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
RTP_11222018_0_1um_scaffold_1706_5
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2707..3330)
DNA (624bp) protein (208aa)
Cytochrome c class I n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DJI4_METS0
class I cytochrome c
Cytochrome c class I {ECO:0000313|EMBL:ADI30219.1}; Flags: Precursor;; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
RTP_11222018_0_1um_scaffold_1706_6
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3366..4604)
DNA (1239bp) protein (413aa)
Oxidoreductase molybdopterin binding protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DJI3_METS0
oxidoreductase molybdopterin-binding protein
Oxidoreductase molybdopterin binding protein {ECO:0000313|EMBL:ADI30218.1}; Flags: Precursor;; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
RTP_11222018_0_1um_scaffold_1706_7
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4647..5171)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCC0_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB63905.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
RTP_11222018_0_1um_scaffold_1706_8
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5168..6619)
DNA (1452bp) protein (484aa)
YVTN family beta-propeller repeat protein n=1 Tax=Rhizobium sp. CF142 RepID=J2AQW0_9RHIZ
YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:EJJ25660.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
YVTN beta-propeller repeat-containing protein
RTP_11222018_0_1um_scaffold_1706_9
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6612..7112)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. CF444 RepID=J2LHC6_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP49551.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
RTP_11222018_0_1um_scaffold_1706_10
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7118..8161)
DNA (1044bp) protein (348aa)
Uncharacterized protein family UPF0324 n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DJI2_METS0
hypothetical protein
Uncharacterized protein family UPF0324 {ECO:0000313|EMBL:ADI30217.1}; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
RTP_11222018_0_1um_scaffold_1706_11
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8309..9205
DNA (897bp) protein (299aa)
Transcriptional regulator, LysR family n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DJI1_METS0
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADI30216.1}; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
Displaying 11 items

View Taxonomy