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RTP_11222018_0_1um_scaffold_3035

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_3035_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1..114
DNA (114bp) protein (38aa)
preprotein translocase subunit SecD n=1 Tax=Thiobacillus denitrificans RepID=UPI00035CB097
preprotein translocase SecD
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_11222018_0_1um_scaffold_3035_2

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136..1080
DNA (945bp) protein (315aa)
Protein-export membrane protein SecF n=1 Tax=mine drainage metagenome RepID=E6QT70_9ZZZZ
Protein-export membrane protein SecF {ECO:0000313|EMBL:CBI10442.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
secF; preprotein translocase subunit SecF
RTP_11222018_0_1um_scaffold_3035_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1095..1793
DNA (699bp) protein (233aa)
ubiG; 3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64)
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ26_9PROT
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
RTP_11222018_0_1um_scaffold_3035_4

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1786..2439
DNA (654bp) protein (218aa)
Putative phosphoglycolate phosphatase {ECO:0000313|EMBL:CBI10446.1}; EC=3.1.3.18 {ECO:0000313|EMBL:CBI10446.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
2-phosphoglycolate phosphatase (EC:3.1.3.18)
Putative phosphoglycolate phosphatase n=1 Tax=mine drainage metagenome RepID=E6QT74_9ZZZZ
RTP_11222018_0_1um_scaffold_3035_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2962..4176
DNA (1215bp) protein (405aa)
Phage integrase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6Z5_NITMU
Phage integrase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
RTP_11222018_0_1um_scaffold_3035_6
unknown

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4176..4688
DNA (513bp) protein (171aa)

This feature has no annotations

RTP_11222018_0_1um_scaffold_3035_7
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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4747..4971
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZM69_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ14582.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_3035_8
Methylophaga aminisulfidivorans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4968..7367
DNA (2400bp) protein (800aa)
Putative uncharacterized protein n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SZQ1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGL54478.1}; TaxID=1026882 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga aminisulfidivorans MP.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_3035_9
unknown

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7370..7651
DNA (282bp) protein (94aa)

This feature has no annotations

RTP_11222018_0_1um_scaffold_3035_10
unknown

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7662..7943
DNA (282bp) protein (94aa)

This feature has no annotations

RTP_11222018_0_1um_scaffold_3035_11
unknown

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7967..8521
DNA (555bp) protein (185aa)

This feature has no annotations

Displaying 11 items

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