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RTP_11222018_0_1um_scaffold_3912

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_3912_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..598)
DNA (597bp) protein (199aa)
lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8] id=12495761 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
lipoyl synthase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_11222018_0_1um_scaffold_3912_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(601..1212)
DNA (612bp) protein (204aa)
lipoate-protein ligase B n=1 Tax=Thiobacillus denitrificans RepID=UPI00037EB0A9
lipoate-protein ligase B
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_11222018_0_1um_scaffold_3912_3
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1213..1488)
DNA (276bp) protein (92aa)
UPF0250 protein mma_3250 n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=Y3250_JANMA
hypothetical protein
UPF0250 protein mma_3250 {ECO:0000255|HAMAP-Rule:MF_00659}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
RTP_11222018_0_1um_scaffold_3912_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1499..2629)
DNA (1131bp) protein (377aa)
cytochrome C550 n=1 Tax=Azoarcus toluclasticus RepID=UPI000371026A
dacC; D-alanyl-D-alanine carboxypeptidase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
RTP_11222018_0_1um_scaffold_3912_5

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comp(2652..3539)
DNA (888bp) protein (296aa)
Putative Lipoprotein n=1 Tax=mine drainage metagenome RepID=E6QNR1_9ZZZZ
Putative Lipoprotein {ECO:0000313|EMBL:CBI08882.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rare lipoprotein A
RTP_11222018_0_1um_scaffold_3912_6

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comp(3536..4633)
DNA (1098bp) protein (366aa)
Rod shape-determining protein RodA n=1 Tax=mine drainage metagenome RepID=E6QNR0_9ZZZZ
Rod shape-determining protein RodA {ECO:0000313|EMBL:CBI08881.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rod shape-determining protein RodA
RTP_11222018_0_1um_scaffold_3912_7
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4623..4976)
DNA (354bp) protein (118aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Putative Penicillin-binding protein 2 (PBP-2) (MrdA) n=1 Tax=mine drainage metagenome RepID=E6QNQ9_9ZZZZ
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_11222018_0_1um_scaffold_3912_8

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comp(4973..6403)
DNA (1431bp) protein (477aa)
Putative Penicillin-binding protein 2 (PBP-2) (MrdA) {ECO:0000313|EMBL:CBI08880.1}; EC=2.4.1.129 {ECO:0000313|EMBL:CBI08880.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Putative Penicillin-binding protein 2 (PBP-2) (MrdA) n=1 Tax=mine drainage metagenome RepID=E6QNQ9_9ZZZZ
penicillin-binding protein 2
RTP_11222018_0_1um_scaffold_3912_9
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6400..6912)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI00036BAA63
rod shape-determining protein MreD
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_11222018_0_1um_scaffold_3912_10

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comp(6912..7754)
DNA (843bp) protein (281aa)
Putative Rod shape-determining protein mreC n=1 Tax=mine drainage metagenome RepID=E6QNQ6_9ZZZZ
Putative Rod shape-determining protein mreC {ECO:0000313|EMBL:CBI08877.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
mreC; rod shape-determining protein mrec
RTP_11222018_0_1um_scaffold_3912_11

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comp(7764..8807)
DNA (1044bp) protein (348aa)
Rod shape-determining protein mreB n=1 Tax=mine drainage metagenome RepID=E6QNQ4_9ZZZZ
Rod shape-determining protein mreB {ECO:0000313|EMBL:CBI08875.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Rod shape-determining protein MreB
Displaying 11 items

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