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RTP_11222018_0_1um_scaffold_324_21

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(21678..22616)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 300.0
  • Bit_score: 317
  • Evalue 4.10e-84
tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01080}; Short=Psi55 synthase {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridylate synthase {ECO:0000255|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000255|HAMAP-Rule:MF_01080}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 300.0
  • Bit_score: 317
  • Evalue 2.10e-83
tRNA pseudouridine synthase B n=1 Tax=Thiobacillus thioparus RepID=UPI00037F3664 similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 300.0
  • Bit_score: 322
  • Evalue 3.50e-85

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
GTGATCTTGAATACACCCATTAAACGTATCAAACGCCGAATTGACGGTGTGTTGTTGCTGAACAAACCAGTCGGTATCACTTCTAATACCGCATTGCAAATCGCAAAACGTCTATTGCAAGCCGAAAAAGCAGGACACACAGGTACGCTGGACCCATTTGCAGATGGTTTATTGCCACTGTGTTTCGGTGAAGCCACCAAATTTTCGCAATACCAACTCGAAGCTGATAAAACTTATAGTGCACTGCTGCAATTGGGTGTAACCACCACCACGGGGGATCCCGAAGGCGAGGTGTTGCAGACCACGCCGGTTAATCTCAGTGCGCAAGCCATTCACACAATCGTAGCGGGCTTTGTCGGCGACATCATGCAAACCCCCCCCATGTATTCTGCGCTTAAATATCAAGGTAAACCCTTGTATGAATATGCACGCGCAGGCATCACCATAGCCCGTCCTGCACGCCCTGTGAGCATACGCGCTATCCACATAGACGCAATCGACTTGAGCGCTGCAACCTGCACTATCACCGTGACTTGTAGTGCAGGGACATATATTCGTACTTTAGCCGAAGATATCGGTAGTCGTTTGGGTTGTGGTGCACATTTAACCCGTTTAACACGTCTCGCCAGTGGCGGTTTTCAATTAGCGCAAGCGGTTACCCTAGTGCAATTGGAGCAGGACGATATTGCAACGCGTGATGCCCGGCTTGCAGCAGCAGATGGCTTGGTTAATTATTTACCGTGTATCTTCGTTGATGCACCCAGCGCAAAATTGCTGATGCAAGGTCAGCATCCATTATTTCAATGTGAGATTGAACAATTCGGTTTGTTACGTGCCTATTATCAACAGCAGTTTTTGGGATTGGTGCAGTTGCAAGCAGATGGCAAGCTCGTCCCACAGCGTTTAATGTCCAGCCGTGACTTATTGGAGACCGTATGA
PROTEIN sequence
Length: 313
VILNTPIKRIKRRIDGVLLLNKPVGITSNTALQIAKRLLQAEKAGHTGTLDPFADGLLPLCFGEATKFSQYQLEADKTYSALLQLGVTTTTGDPEGEVLQTTPVNLSAQAIHTIVAGFVGDIMQTPPMYSALKYQGKPLYEYARAGITIARPARPVSIRAIHIDAIDLSAATCTITVTCSAGTYIRTLAEDIGSRLGCGAHLTRLTRLASGGFQLAQAVTLVQLEQDDIATRDARLAAADGLVNYLPCIFVDAPSAKLLMQGQHPLFQCEIEQFGLLRAYYQQQFLGLVQLQADGKLVPQRLMSSRDLLETV*