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RTP_11222018_0_1um_scaffold_500_17

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 15218..16141

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoS n=1 Tax=Thiobacillus thioparus RepID=UPI0003782783 similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 311.0
  • Bit_score: 337
  • Evalue 7.90e-90
RNA polymerase sigma factor RpoS similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 310.0
  • Bit_score: 334
  • Evalue 3.20e-89
Tax=RBG_16_Betaproteobacteria_58_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 304.0
  • Bit_score: 346
  • Evalue 2.40e-92

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Taxonomy

RBG_16_Betaproteobacteria_58_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGAGCGTGGACGATACGGATAGCCAATCTCCAACGTTGCATGACGACGAACTCATCGCACAAACAGCCTGGCTAGATACGTTGATCGATGAGCGACAAGCGGATGTGACGCAGATGTATATGCATGATATAGGTCATGATGCACTGTTGAATGCGGCTGATGAGTTGATATTGGCAAGACAGTTTGCGCAAGGTGATTTTGCGGCACGGCAAAAGATGATTACCTGCAATTTGCGTCTGGTTGTTAGTATCGCTAAGCACTATCAGCATCGCGGCGTGCCATTGCTGGATTTGATAGAAGAAGGCAATTTGGGGCTGATACACGCATTAGAAAAATTTGATCCTGAGCGTGGTTTTCGTTTCTCTACGTATGCGAGTTGGTGGGTACGTCAGCATATTGAACGCGCCATCATGAATCAGTCACGCACGGTGCGTTTGCCAGTGCATATAGTGAAAGCAATTAATGTTATTTTACGCGCACGGCATCACTTGAGCGCGCATGGTGTGCACGATGTGTGTGTGGCAGATATTGCGCATTTAGTGCAAATGTCCGAAGCAGAAGTGAGTGAATTACTGCGGTTGAATGATGGTGCGGTATCATTGGATAGCCCATTAGGTGACGATGCTGATTTAAGCATGGGGGATGTTATCGCTGATGAGGCAGCGCAGTTGCCAGAGGATATATTGGCACAAGCCGAAGTCGTCAATTTTATTCAGGCCTGGTTAAGTACACTGACCGATAAGCAGCGTTGGGTAATCGTGCGACGTTTTGGGTTGAATAATCAGGATATAGCGACGTTGGAGCAAATAGCGGAAGATTTGAACCTGAGTCGTGAGCGCGTGCGCCAAATTCAGGCTGAGGCTTTAGTGCAATTGCGTAAAACATTGCGCCGTGTTGGAATGGATAAAGCGGGTTTGTTGTGA
PROTEIN sequence
Length: 308
MSVDDTDSQSPTLHDDELIAQTAWLDTLIDERQADVTQMYMHDIGHDALLNAADELILARQFAQGDFAARQKMITCNLRLVVSIAKHYQHRGVPLLDLIEEGNLGLIHALEKFDPERGFRFSTYASWWVRQHIERAIMNQSRTVRLPVHIVKAINVILRARHHLSAHGVHDVCVADIAHLVQMSEAEVSELLRLNDGAVSLDSPLGDDADLSMGDVIADEAAQLPEDILAQAEVVNFIQAWLSTLTDKQRWVIVRRFGLNNQDIATLEQIAEDLNLSRERVRQIQAEALVQLRKTLRRVGMDKAGLL*