name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RTP_11222018_0_1um_scaffold_500_1
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..1549
|
Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase (EC:3.1.1.- 6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] id=12495544 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
threonyl-tRNA synthetase
|
|
RTP_11222018_0_1um_scaffold_500_2
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1683..2147
|
Translation initiation factor IF-3 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AK26_9PROT
infC; translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
|
|
RTP_11222018_0_1um_scaffold_500_3
Chromobacterium piscinae, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2299..2496
|
50S ribosomal protein L35 n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000364FFA7
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=686831 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium piscinae.;"
rpmI; 50S ribosomal protein L35
|
|
RTP_11222018_0_1um_scaffold_500_4
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2509..2868
|
50S ribosomal protein L20 n=1 Tax=Thauera sp. 63 RepID=N6X7F9_9RHOO
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
rplT; 50S ribosomal protein L20
|
|
RTP_11222018_0_1um_scaffold_500_5
GWA2_Gallionellales_55_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2996..3979
|
Phenylalanine--tRNA ligase alpha subunit id=2036119 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
phenylalanyl-tRNA synthetase subunit alpha
Tax=GWA2_Gallionellales_55_18_curated
|
|
RTP_11222018_0_1um_scaffold_500_6
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3991..6354
|
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABR7_9PROT
Tax=CG_Beta_01
|
|
RTP_11222018_0_1um_scaffold_500_7
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6362..6667
|
Integration host factor subunit alpha n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SF47_GALCS
integration host factor, subunit alpha
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
|
|
RTP_11222018_0_1um_scaffold_500_8 |
Not on your lists |
6645..7019
|
Transcriptional regulator, MerR family protein n=1 Tax=sediment metagenome RepID=D9PLM3_9ZZZZ
Transcriptional regulator, MerR family protein {ECO:0000313|EMBL:EFK95542.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
MerR family transcriptional regulator
|
|
RTP_11222018_0_1um_scaffold_500_trna_1
unknown
|
Not on your lists |
7066..7139
|
transferRNA Pro
|
|
RTP_11222018_0_1um_scaffold_500_9
Serratia sp. DD3, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7240..7866)
|
Uncharacterized protein n=1 Tax=Serratia sp. DD3 RepID=V5E6L7_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KEY60341.1}; TaxID=1410619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia sp. DD3.;"
hypothetical protein
|
|
RTP_11222018_0_1um_scaffold_500_10
Serratia sp. DD3, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7866..9449)
|
von willebrand factor, type A n=1 Tax=Serratia sp. DD3 RepID=V5BP85_9ENTR
Marine proteobacterial sortase target protein {ECO:0000313|EMBL:KEY60340.1}; TaxID=1410619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia sp. DD3.;"
von Willebrand factor type A
|
|
RTP_11222018_0_1um_scaffold_500_11
Serratia sp. DD3, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9458..10654)
|
Uncharacterized protein n=1 Tax=Serratia sp. DD3 RepID=V5C4Y5_9ENTR
Toxic anion resistance protein (TelA) {ECO:0000313|EMBL:KEY60339.1}; TaxID=1410619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia sp. DD3.;"
hypothetical protein
|
|
RTP_11222018_0_1um_scaffold_500_12
Serratia sp. DD3, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10697..11803)
|
Uncharacterized protein n=1 Tax=Serratia sp. DD3 RepID=V5C3G8_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KEY60338.1}; TaxID=1410619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia sp. DD3.;"
hypothetical protein
|
|
RTP_11222018_0_1um_scaffold_500_13
unknown
|
Not on your lists |
12239..12394
|
This feature has no annotations |
|
RTP_11222018_0_1um_scaffold_500_14
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12833..13573
|
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
5'-nucleotidase SurE n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AG50_9PROT
surE; stationary phase survival protein SurE
|
|
RTP_11222018_0_1um_scaffold_500_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13570..14232
|
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B2P9_9PROT
pcm; protein-l-isoaspartate o-methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
RTP_11222018_0_1um_scaffold_500_16
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14232..15221
|
Peptidase M23 n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SF51_GALCS
Murein hydrolase activator NlpD {ECO:0000313|EMBL:GAO32280.1}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
peptidase M23
|
|
RTP_11222018_0_1um_scaffold_500_17
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15218..16141
|
RNA polymerase sigma factor RpoS n=1 Tax=Thiobacillus thioparus RepID=UPI0003782783
RNA polymerase sigma factor RpoS
Tax=RBG_16_Betaproteobacteria_58_11_curated
|
|
RTP_11222018_0_1um_scaffold_500_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16138..16812
|
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily id=12494524 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
HAD family hydrolase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_11222018_0_1um_scaffold_500_19
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16804..17199)
|
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8R5_NITMU
Uncharacterized protein {ECO:0000313|EMBL:GAO35181.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
|
|
RTP_11222018_0_1um_scaffold_500_20
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17286..18539
|
aminotransferase (EC:2.6.1.-)
Probable aspartate transaminase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKI6_THIDA
Probable aspartate transaminase {ECO:0000313|EMBL:AAZ96795.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_11222018_0_1um_scaffold_500_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18563..19879
|
homoserine dehydrogenase (EC:1.1.1.3)
homoserine dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI0003646415
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_11222018_0_1um_scaffold_500_22
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19892..21334
|
threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYV9_9GAMM
Threonine synthase {ECO:0000313|EMBL:EIJ36552.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
|
|
RTP_11222018_0_1um_scaffold_500_23
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21344..21952
|
Glutathione S-transferase domain protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z1J5_9NEIS
glutathione S-transferase
Tax=RBG_16_Betaproteobacteria_58_11_curated
|
|
RTP_11222018_0_1um_scaffold_500_24
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22102..23019
|
6-phosphogluconate dehydrogenase, decarboxylating (EC:1.1.1.44)
6-phosphogluconate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00037D1298
Tax=RBG_16_Betaproteobacteria_58_11_curated
|
|
RTP_11222018_0_1um_scaffold_500_25
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23016..24497
|
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
glucose 6-phosphate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00037D7284
Tax=CG_Hydro_01
|
|
RTP_11222018_0_1um_scaffold_500_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24567..25688)
|
2-alkenal reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI000367C883
peptidase S1 and S6, chymotrypsin/Hap
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_11222018_0_1um_scaffold_500_27
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25865..26458
|
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AB91_9PROT
Ubiquinol-cytochrome C reductase {ECO:0000313|EMBL:GAO35857.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
ubiquinol-cytochrome c reductase, iron-sulfur subunit
|
|
RTP_11222018_0_1um_scaffold_500_28
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26462..27685
|
cytochrome B n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FA39A
cytochrome B subunit of cytochrome bc1
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_11222018_0_1um_scaffold_500_29
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27685..27936
|
Cytochrome c1 n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DLM2_METS0
cytochrome c1
Cytochrome c1 {ECO:0000313|EMBL:ADI28706.1}; Flags: Precursor;; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
|