ggKbase home page

RTP_11222018_0_1um_scaffold_552_13

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 11187..14468

Top 3 Functional Annotations

Value Algorithm Source
acriflavin resistance protein id=12496502 bin=THIO_MID species=Thiomonas intermedia genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 1082.0
  • Bit_score: 1638
  • Evalue 0.0
putative Multidrug efflux transporter AcrB similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 1086.0
  • Bit_score: 1468
  • Evalue 0.0
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 1082.0
  • Bit_score: 1639
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3282
ATGTCTGATCACCAACCTACCGAACTCAATATCGCAGGGAAAATCGCGCGTACTTTTCTAGAATCAAAGATCACCGCGATGATCATGCTCGCCATTACACTAGCAGGGGTGATGGCGCTGTTTATCACCGCACGCGAATACAACCCTCAAATTGTCGTGCCTGCTGCCAATATTATCGTTGCCAAACCTGGCGCGTCTGCGGTTGAAATTCAAAACACGATCATCAAGCCATTAGAAGCCATCATGAATGCACAATCAGGCGTGAAGCACAGCTATGGCTATGCAGCGGCTGATTTTGGCGTCGTCACTGTACAATTTGACGTAGGACAAGACCAAGAACGCAGCTTGGTTAAACTTTACAATCAGCTGGTACAAAACTGGGATCGTATACCCACAGGCGCGATGCAACCTATCGTGCGTCCAATTAACGTCGATGATGTGCCGATTATTACCCTCACCCTCAGCAGCCAGAGCATGAATGACGCGCAATTGCGTGATGTCGGCAACCATGTGCTGGAGCAATTACGCAATGTACCCGGTGTGTCTTTTACCGAAATTATGGGTGGCGCGCGCCATGCAGTAAATGTCTGGATAGATCCCGTTAAATTATCAGCAACCGGCGTAAGCTTGGATCAAGTGGATAAAATGCTGCAAGGCGCAAACGCGTCCATGCCGCTAGGCGCGCTGGTGAACAACAATCGCAATCACCCGCTGCGTTTGTCGGGCTTTATCGGCAATGCACAAGAAGTCGGCAAACTCATCATCGGCGCACCCAATGGTAAAGCCGTGTTTTTACGCGATGTCGCGACTATCCAGGAAGGCGCAGCAGAAACTGATGAATATAGTCGCTTTGCTTACGGACCCGCCAGCGACAAAACCGCTCGTACTGGTGAATCTCCTGCGGTAACCATCGCCATTGCTAAAAAAGCGGGCACCAACGCTGTTGTCGTCGCTGATGCTGTACTAAAAAAACTGGAAGTTCTCAAGCGCGCTGCCATTCCACAAGGCATTACTGTCAGCGTAACCCGTGATGATGGTGCGAAAGCCGATGATGCCGTCAACACACTCATGGAACACCTGGGCATCGCAATTGGCTCCGTAGTCGTTATTCTGGTGATTTTCCTGGGCTGGCGCGAAGCCGCTATTGTCACCCTCACAGTACCCCTGATACTGTTTGTAGTACTCACCATCGGACTATTTGCGGGTCAGACTATCAACCGCATCACGTTATTTGCGCTGATATTGTCATTGGGTTTGCTGGTAGATGCCGCCATTGTGGTGATCGAAAACATCCACCGCCACATGCACCAAGGGGGAGGTAAAGATTTCAAAACCGCCTTGATTGCGGCGACTAATGAAATCGGCAACCCTACCAATATCGCCACTATCGCGGTGATACTGGCTTTCGTGCCTATGGCATTCGTCACCGGCATGATGGGCCCATTCATGCAACCCATCCCGTTTAACGTACCAATCGCTATGATAGCCTCGTTGCTAATTGCTTACATGGTTGTACCTTGGGCGGCGAATCTATGGTTGGCAGGCAAAGCGGCCAAGTCTTTAATCGAACACAAGCCACTGGGTGCAGATCACGTAGAACAAAAAGACCCATTGCATCGTGCTTATGTCAGCGTCATTACACCTCTCATTAAACACAGCGGTAAGCGCAATATACTATTCCTTATTGTCATCGGCTTGCTCGTCGCGGCCATGATTCAACCTGCTTGGCAATTTATCCGCCCCTCAGGCATTAACGGTCCATTATCCGCGTTGGGTGTAGAGCTCAAAATGCTGCCTAATGACAATACCAATACGTTCTTGCTTCAAGTTGACACACCTGCAGGAACCACATTGCAGCAGACCGATGCGGTTGCCCGTGCAGTCGGTGATGTATTAAATAAAACCGAATTTGTTACGGATTACCAGACTTTCCTGGGGATGACTGCGCCGATAGATTTTGCCGCATTAGTGCGCGGTGACATGCTCAAACGGGGTGACAATATTGCACAATTACGAGTAAATCTAACCAATAAACATCATCGTTCCGTCGCTTCACACGAAATTGTGCAGCGTCTTAATATTGCGTTGAATGACGTCCGCGAAGCGCATCCGACGGCTAAAATAAAACTATATGAAACGCCGCCCGGACCACCCGTGCAGTCACAAATCCTAGCTGAGTTATATGGTCCAGACTATGCCAAATTACGCAGCGCAGCCGCCGAAGTTAACCGTGACTTTGATAAGGTCTATGGCATAGTCAACGTTGACAACTCAGTTACCAGCACCGTCGATAGTTTCCACATCAAGGTAGATAGGGAAAAAGCGGCGTTGTCCGGCGTTGCTGTAGGTCAGGTTGCCAAGTTGCTGCATGATTATGTATCTGGCTTCAACATTGGCACAATACACATGGATAAGAGTTTGGAGCCTGTAAATCTGACAGTCCGTATCCCGCGTAGCCAACGCCAAACTCCCGAGCAGATACTGGCAATACACATCACCAACATGAGCGGCAAACAAATCCCGTTATCTGCGATTGCCAGTGTAGAAATAGCAACGCAAGACAAGCCTATCTATGACCGAGATCAGCATCCTGTGGTAATGGTAGGTGGTGAATTGCTACAATCCAGTCCTGTTTATGCGGTATTAGCCTTGGACAAAATGCTAGACGGCAAGATGTTAGCTAACGGCATAAGCTTCAAAACTGGCAATTTAGGCTTTGTAGAAGCACAGCCTGACGACATCATCAACTACCACTTGCTGTGGGGCGGCGAAATGCGGCTAACACTAGACGTGTTTCGTGATTTAGGCTCCGCATTCATCATCGCACTGGTGTTCATTTACTTGATGTTAGTGGGCTACTACAAATCCTTCATGATGCCGCTCATCGTCATGGGTGCAATACCGCTGACCTTAGTGGGTGTGTTCCCAGGTCATTGGCTTACCCAACAAGCATTCACTGCCACATCAATGATAGGCGTGATTGCACTGGCGGGTGTGGTCGTACGTAACTCATTGTTACTGATAGATTTTATTATTGATTATCGGAAACAAGGTTACAGCTTAGAACAAGCCGTGATTGAAGCAGGTGCGGTGCGTTTCCGCCCTATCATGCTAACTGCACTGGCTATTATCCTGGGCTCTGCCATTATGATTACTGACCCCGTATTTGGTGGGCTGGCAGTTTCCTTGATATTCGGTACATTTGCTTCCACCATACTGACGCTAGTTATCATCCCATTAATGTATTATCTGTGGGAAAATCGTCTGCAAAAGCCTGTCTAA
PROTEIN sequence
Length: 1094
MSDHQPTELNIAGKIARTFLESKITAMIMLAITLAGVMALFITAREYNPQIVVPAANIIVAKPGASAVEIQNTIIKPLEAIMNAQSGVKHSYGYAAADFGVVTVQFDVGQDQERSLVKLYNQLVQNWDRIPTGAMQPIVRPINVDDVPIITLTLSSQSMNDAQLRDVGNHVLEQLRNVPGVSFTEIMGGARHAVNVWIDPVKLSATGVSLDQVDKMLQGANASMPLGALVNNNRNHPLRLSGFIGNAQEVGKLIIGAPNGKAVFLRDVATIQEGAAETDEYSRFAYGPASDKTARTGESPAVTIAIAKKAGTNAVVVADAVLKKLEVLKRAAIPQGITVSVTRDDGAKADDAVNTLMEHLGIAIGSVVVILVIFLGWREAAIVTLTVPLILFVVLTIGLFAGQTINRITLFALILSLGLLVDAAIVVIENIHRHMHQGGGKDFKTALIAATNEIGNPTNIATIAVILAFVPMAFVTGMMGPFMQPIPFNVPIAMIASLLIAYMVVPWAANLWLAGKAAKSLIEHKPLGADHVEQKDPLHRAYVSVITPLIKHSGKRNILFLIVIGLLVAAMIQPAWQFIRPSGINGPLSALGVELKMLPNDNTNTFLLQVDTPAGTTLQQTDAVARAVGDVLNKTEFVTDYQTFLGMTAPIDFAALVRGDMLKRGDNIAQLRVNLTNKHHRSVASHEIVQRLNIALNDVREAHPTAKIKLYETPPGPPVQSQILAELYGPDYAKLRSAAAEVNRDFDKVYGIVNVDNSVTSTVDSFHIKVDREKAALSGVAVGQVAKLLHDYVSGFNIGTIHMDKSLEPVNLTVRIPRSQRQTPEQILAIHITNMSGKQIPLSAIASVEIATQDKPIYDRDQHPVVMVGGELLQSSPVYAVLALDKMLDGKMLANGISFKTGNLGFVEAQPDDIINYHLLWGGEMRLTLDVFRDLGSAFIIALVFIYLMLVGYYKSFMMPLIVMGAIPLTLVGVFPGHWLTQQAFTATSMIGVIALAGVVVRNSLLLIDFIIDYRKQGYSLEQAVIEAGAVRFRPIMLTALAIILGSAIMITDPVFGGLAVSLIFGTFASTILTLVIIPLMYYLWENRLQKPV*