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RTP_11222018_0_1um_scaffold_1194_14

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(9950..10663)

Top 3 Functional Annotations

Value Algorithm Source
High-affinity branched-chain amino acid transport ATP-binding protein livF (LIV-I protein F) n=1 Tax=mine drainage metagenome RepID=E6QRC9_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 236.0
  • Bit_score: 308
  • Evalue 3.00e-81
High-affinity branched-chain amino acid transport ATP-binding protein livF (LIV-I protein F) {ECO:0000313|EMBL:CBI09801.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 236.0
  • Bit_score: 308
  • Evalue 4.20e-81
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 236.0
  • Bit_score: 259
  • Evalue 7.80e-67

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 714
ATGAGCGACTTACTCACAGTCCATAATTTACGTGTCGCTTATGGTCAAATCCATGCGGTACACGATGTCAGCCTTAATGTGATAGCCGCTGAGCGTGTGTGCTTGATAGGCGCGAATGGCGCAGGCAAAACCTCATTACTCAAAGCCATCGCCGGCATGATACCTGCAGCGGCCGGTACAGTGATATTTGCAGGGCAGCGTATCAGCCACTTACCTTCACATCAAATTGTACCCATGGGTATCACTCTCGTCCCTGAAGGGCGTGGCATATTTACACGGATGAGCGTGGCAGAGAATCTTGCCATGGGTGCTTATATCCGCCGAGATAAGTCAGTCGTTGCCACCGAAATCGATACTATATATCAACGCTATCCCCGTTTAGGCGAGCGTCGCAACCAGCCAGCAGGGCAGCTATCAGGTGGGGAACAGCAATTACTCGCCATCAATCGCGCATTATTATCGCGACCACGCTTGCTCCTACTGGATGAACCCAGCATGGGCTTGGCCCCGCTGATGGTCAAGGCGATATTCGAGACCTTAGACCAGGCGCATCAACAAGGCGTGGCTATCCTGCTAGTCGAACAAAACGCTCACCTAGCCCTCGCCCACAGCGACAGAGCCTATATCATCGCCAACGGCCAGATTACCCAGCACGGCAACGCCGCCCAGCTTGCGCAGGATCATGATATTAAGCAGGCTTATTTTGGGGAGTAG
PROTEIN sequence
Length: 238
MSDLLTVHNLRVAYGQIHAVHDVSLNVIAAERVCLIGANGAGKTSLLKAIAGMIPAAAGTVIFAGQRISHLPSHQIVPMGITLVPEGRGIFTRMSVAENLAMGAYIRRDKSVVATEIDTIYQRYPRLGERRNQPAGQLSGGEQQLLAINRALLSRPRLLLLDEPSMGLAPLMVKAIFETLDQAHQQGVAILLVEQNAHLALAHSDRAYIIANGQITQHGNAAQLAQDHDIKQAYFGE*