ggKbase home page

RTP_11222018_0_1um_scaffold_1194_16

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(11435..12484)

Top 3 Functional Annotations

Value Algorithm Source
branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein id=12496169 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 345.0
  • Bit_score: 539
  • Evalue 1.60e-150
branched-chain amino acid ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 345.0
  • Bit_score: 496
  • Evalue 5.60e-138
Tax=CG_Delta_06 similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 343.0
  • Bit_score: 559
  • Evalue 2.00e-156

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Delta_06 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
ATGAGCGCGCGTAAGCAGGCCTGGTTTACTTTCGTCGCGCTGGCCATCGGTTTGGCGCTATTGCCGTTCCTGGTGGAAGCTGGTCTGGGCCGTTCATGGGTACGTATTCTTGATTTGGCTTTGCTGTACATAATACTGGCAGTGGGTTTGAATATCGTTGTTGGTTATGCGGGGCTGCTGGATTTGGGCTATGTCGCTTTTTACGCAGTGGGTGCCTATTTTTACGCGCTATTAGCATCGCCGCAATTTGGCTTGCATTTGCCGTTCTGGCTGTTGTTGCCAATGGGAGCGGCATTGGCGGGTGTGTTTGGTTTGCTGCTGGGTGCGCCGACTTTGCGCTTGCGCGGCGATTATTTAGCTATTGTCACCCTGGGCTTTGGTGAAATCATTCGTATATTCCTCAATAATCTCAATGCGCCCATTAATGTCACCAATGGTCCGCAAGGCGTAAATCTGATTGATCCTATCAGCATCGCTGGTTTTTCATTAGGTAAAACGCAGCAACTGTTTGGTATTACCTTCTCTTCGCCCCAGCTTTATTATTATTTGTTTCTTATCCTAACCTTAGCCGCGATTTTCGTCGCGTTGCGGTTGCAGGATTCACGCATAGGGCGAGCTTGGGCGGCGATACGTGAAGATGAATTGGCTGCGCAGGCAAGTGGAATTAATCTGCGCAATATCAAATTGCTCGCTTTCGCTATGGGCGCGACTTTTGGCGGGTTGGCAGGCGGGTTATTCGCAGGATTCCAAGGCTTTATCAGCCCCGAGAGCTTCAACCTGATGGAATCCATCATGATACTGTGCATGATCGTATTGGGTGGCATGGGCAATATTCCTGGGGTGATACTGGGCGCGGTCTTGCTCACGGTGTTGCCGGAAGCATTGCGCTATGTGGGTGACTTGCAACGCGCCTGGATAGGTCACGTCGTGGTTGATCCTGCGGATTTACGCATGTTGTTATTTGGCTTCGCGCTTATTCTGATGATGCTGTTCCGCCCTGCTGGTTTGTGGCCATCACGCCGCCACCAGCGCGAGTTGCAACATGACTGA
PROTEIN sequence
Length: 350
MSARKQAWFTFVALAIGLALLPFLVEAGLGRSWVRILDLALLYIILAVGLNIVVGYAGLLDLGYVAFYAVGAYFYALLASPQFGLHLPFWLLLPMGAALAGVFGLLLGAPTLRLRGDYLAIVTLGFGEIIRIFLNNLNAPINVTNGPQGVNLIDPISIAGFSLGKTQQLFGITFSSPQLYYYLFLILTLAAIFVALRLQDSRIGRAWAAIREDELAAQASGINLRNIKLLAFAMGATFGGLAGGLFAGFQGFISPESFNLMESIMILCMIVLGGMGNIPGVILGAVLLTVLPEALRYVGDLQRAWIGHVVVDPADLRMLLFGFALILMMLFRPAGLWPSRRHQRELQHD*