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RTP_11222018_0_1um_scaffold_1198_15

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 12729..13040

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 103.0
  • Bit_score: 100
  • Evalue 1.30e-18
DNA topoisomerase I (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 106.0
  • Bit_score: 97
  • Evalue 2.20e-18
DNA topoisomerase 1 n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CPD3_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 103.0
  • Bit_score: 100
  • Evalue 9.30e-19

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Taxonomy

Roseibium sp. TrichSKD4 → Roseibium → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
GTGACTTTGAATGAAGGGCGTTACGGCTGGTATGTCAAACATGGTAGCGTCAACGCCACCATCCCAAAAGATACCAAACCCGATGAAGTCACGCTAGAAATAGCCCTACCACTACTCGCTGAACGCGCCAGCAAAGGCAAGCCTGTGCGCAAAAAAGCAGCCAGCAAAACGACAGCAACGGCAAAAAAATCGGCAGCCACCAAGAAAACGGCAGTTAAAAAAGCAACCGCTAAGAAACCAGCGGCAACGAAAACCACGACCAAAAAAATGACTCCTAAAAAAGCGACTGCCAAAAAAGAAACAACTGCGTAG
PROTEIN sequence
Length: 104
VTLNEGRYGWYVKHGSVNATIPKDTKPDEVTLEIALPLLAERASKGKPVRKKAASKTTATAKKSAATKKTAVKKATAKKPAATKTTTKKMTPKKATAKKETTA*