ggKbase home page

RTP_11222018_0_1um_scaffold_672_24

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(14747..15307)

Top 3 Functional Annotations

Value Algorithm Source
Transposase IS4 family n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82VJ0_NITEU similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 178.0
  • Bit_score: 285
  • Evalue 3.70e-74
IS4 family transposase similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 178.0
  • Bit_score: 285
  • Evalue 1.00e-74
Transposase IS4 family {ECO:0000313|EMBL:CAD85004.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 178.0
  • Bit_score: 285
  • Evalue 5.20e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosomonas europaea → Nitrosomonas → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGGCGCGGTTCAAACCTGTACACAAAGGCCTAAAACTCTTGCCGGTCGATTTTGACCGGCAAGTCATTCCCGGCAGTTTCGAATACGCTTTGTGTCACCTGGTGGATCATGAACTCGATCTTTCCGCCTTCCATGCCCGTTACCATAATGATGTCGAAGGCGCCTCTGCTTATGACCCCGCAGTGTTGATCAAGATCATCCTGCTAGCCTATAGCCGCGGTCTCATTCACAGCCGCAAGATCGAAGCGGCTTGCCGCGAGAATGTACTGTTTATTGCGGTATCCGGCGACAGCCAACCCCACTTCACCACACTGGCTGCCTTTGTCTCTGGCATGGGAGACACCGTTGTCAAACTATTTGGACAAGTCCTGCTGATCTGCGACCGTCAAGGTTTAATTGGACGGGAGATGTTTGCCATTGACGGTGTCAAGCTGCCTGCCAATGCCAGTAAAGCCAAGTCAGGCACGCGTGCCGATTATCAACGCCAGGTGGAGAGGATGGAACGTACCGCCAAACAAATGGTGGAGAAACATCTGCGGCGCCAAACGATGATGTGTTGA
PROTEIN sequence
Length: 187
MARFKPVHKGLKLLPVDFDRQVIPGSFEYALCHLVDHELDLSAFHARYHNDVEGASAYDPAVLIKIILLAYSRGLIHSRKIEAACRENVLFIAVSGDSQPHFTTLAAFVSGMGDTVVKLFGQVLLICDRQGLIGREMFAIDGVKLPANASKAKSGTRADYQRQVERMERTAKQMVEKHLRRQTMMC*