ggKbase home page

RTP_11222018_0_1um_scaffold_611_31

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(21208..21852)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000364F3D0 similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 214.0
  • Bit_score: 328
  • Evalue 2.60e-87
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=686831 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium piscinae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 214.0
  • Bit_score: 327
  • Evalue 8.00e-87
rplC; 50S ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 214.0
  • Bit_score: 323
  • Evalue 4.00e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chromobacterium piscinae → Chromobacterium → Neisseriales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGAGTTTAGGACTCGTCGGTCGTAAGATTGGCATGACCCGCCTGTTTGCAGAGGATGGTACTACCATCCCTGTCACAGTGCTGGATGTGTCGAATAACCGCGTAACTCAAATCAAAACAACTGAAATTGATGGCTACAATGCCGTTCAAGTTGCTTTTGGTGTGCGTCGCGCTAGTCGTGTTACCAAAGCGGCTGCTGGACATTTAGCGAAAGCGGGTGTTGAAGCGGGTCGTTTGTTGAAAGAGTTTCGTTTACCTGCGACTGAAGCGCCTGCGCTAGTTGCTGGTAATGTGGTAAGTGTAGAAATATTCCAGGCAGGTCAACTAGTTGATGTAACGGGTACTACGCTAGGTAAGGGTTTTTCTGGTGTTATTAAGCGCCACCATTTCTCTTCTAACCGTGCCAGTCACGGTAACTCACGTTCGCACAATACACCAGGTTCTATCGGTCAGGCGCAAGATCCTGGTCGCGTGTTTCCGGGTAAGCGTATGGCTGGTCAATTGGGCGCGGTGCAACGCACTGTGCAGAAATTGGAGGTTGTCCGCATTGATACCGAGCGCCAATTGATTTTGGTTAAGGGTGCGGTTCCTGGTTCTAAAGGCGGGCATGTTGTTGTTCGTCCTAGCGTGAAGGTAGGTGCCTAA
PROTEIN sequence
Length: 215
MSLGLVGRKIGMTRLFAEDGTTIPVTVLDVSNNRVTQIKTTEIDGYNAVQVAFGVRRASRVTKAAAGHLAKAGVEAGRLLKEFRLPATEAPALVAGNVVSVEIFQAGQLVDVTGTTLGKGFSGVIKRHHFSSNRASHGNSRSHNTPGSIGQAQDPGRVFPGKRMAGQLGAVQRTVQKLEVVRIDTERQLILVKGAVPGSKGGHVVVRPSVKVGA*