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RTP_11222018_0_1um_scaffold_1033_14

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(12456..13019)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma factor n=1 Tax=mine drainage metagenome RepID=E6QTU4_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 179.0
  • Bit_score: 245
  • Evalue 2.50e-62
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:CBI10666.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 179.0
  • Bit_score: 245
  • Evalue 3.50e-62
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 184.0
  • Bit_score: 229
  • Evalue 4.00e-58

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 564
GTGGCAAATATACACACGCTAGAACGGTTTTTGGCTGAGGTAGAGCGTAGGGCGTATCGTCAAGCGGCATTTGCAGTGCGTGATGATCAGGCGGCGTTGGATATCGTTCAGGATGCGATGATGAAGCTGGCGGAAAAATATAGTAACCACCCACCCGCCGAGTTTCCTATGTTATTCCAGCGCATTTTGCAAAATACGATACGTGATTATTACCGTCGTCAAAAAGTACGGAATTATTGGGTCACCGCGCTGTCTTTCATGACACTTGGGCGTAATGCTGAAGATGATGAAGAAGCATTGGAATATGATCAGGTTGCAGACGAAAAAAACAGTCCGGTAAATAGCTTGATAACCGGCAAGAATTTTGCTTTGATTGAAGCTGCTATAGAAAAATTGTCTGCACGTCAACGTGAAGCCTTCCTACTGCGTTATTGGGAGGAGATGGATATAGCAGAAACAGCACAAGTGATGGGTTGCTCCGAAGGCAGCGTCAAAACACACTGTTCACGTGCAGTACAAGCACTTGCTGCGATGCTGAAAGAGAAAGGGATGACCGATGGATAA
PROTEIN sequence
Length: 188
VANIHTLERFLAEVERRAYRQAAFAVRDDQAALDIVQDAMMKLAEKYSNHPPAEFPMLFQRILQNTIRDYYRRQKVRNYWVTALSFMTLGRNAEDDEEALEYDQVADEKNSPVNSLITGKNFALIEAAIEKLSARQREAFLLRYWEEMDIAETAQVMGCSEGSVKTHCSRAVQALAAMLKEKGMTDG*