ggKbase home page

RTP_11222018_0_1um_scaffold_1299_27

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 21194..22408

Top 3 Functional Annotations

Value Algorithm Source
cca; tRNA nucleotidyltransferase (EC:2.7.7.72) similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 402.0
  • Bit_score: 541
  • Evalue 1.30e-151
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI0002F3B02B similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 402.0
  • Bit_score: 547
  • Evalue 8.60e-153
Multifunctional CCA protein {ECO:0000256|HAMAP-Rule:MF_01261, ECO:0000256|SAAS:SAAS00054545}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 400.0
  • Bit_score: 545
  • Evalue 4.60e-152

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herbaspirillum sp. CF444 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
ATGCAAATTTACACGGTAGGGGGCGCGATACGCGATAAGCTACTGGGCTTGCCTGTTAAAGACCGTGATTTTGTAGTGGTGGGGACTACGCCTGAGGTAATGGTGGCGGAAGGTTATTTACCTGTGGGTAAAGATTTCCCTGTTTTTTTGCATCCGCATACACGTGAGGAATATGCGCTGGCGCGAACTGAGCGTAAAACTGCGCCTGGTTACAAGGGGTTTGTCATCCACGCTGATCCTGCGGTGAGTTTGGAGCAGGATTTAGCGCGCCGTGACTTCACTGTAAATGCAATCGCCCAAGCGGATGATGGTACCTTAATCGACCCGTATCATGGTCAAGCGGACTTGGTTGCACGCAAGCTTCGTCACGTTAGCACTGCGTTTAGTGAAGACCCTGTGCGAATTTTGCGGGCGGCGCGGTTCATGGCACGGTTTCAAGATTTTAGTATTGCGCCAGAAACGATGGCGTTGATGCGCGATATGGTAGCAGCGGGTGAGGTTGACGCGCTCGTGCCTGAGCGTGTTTGGCAAGAATTGGCACGGGGTCTGATGGAAGCACGACCGTCACGGATGTTTATGGTGTTACGTGAATGTGGCGCGTTGACGCGTATATTGCCTGAGCTGGATGCGCTGTTTGGGGTGGCGCAGCCTGAACAGCATCACCCTGAGATAGATACCGGTGTGCATGTGATGATGGTGGTGGATTATGCGGCGAGCGCCGGTTTTGATTTGCCTGTGCGTTTTGCTGCGTTGATGCATGATGTGGGTAAAGGGTTAACCCCCCCTGCGCTATGGCCTAAGCATCACGGACATGAGAATAGCGGTGTGGCGTTGGTGAAAGCGTTATGTACGCGCTTGCGTATTCCTAAAGAGTGCACGGACTTGGCCGTGTTGGCGACGCGTTATCATGGTGATATACATCGCGCGCAGCAATTGCGCGCGGATACAGTGGTTAAGTTATTGGGCGCGGTGGATGCCTATCGCCGTCCTGAACGCTTCGTACAATTATTGCAGGCCTGTCTCGCTGATGCGCGGGGACGATTAGGATTTGAGCAGGTGGCCTATCCACAAATGGATTATATGCAAGCGGCGTTAGCGGTGGCAGTGGGTATCGATACGGCGGCGATAGTCGCAGCTGTGACTCACCCCGCACAAATGGGTGAGCGAGTGACGGCGGCACGGGTGGCAGCATTAACGGTATGGATGAATAGATGA
PROTEIN sequence
Length: 405
MQIYTVGGAIRDKLLGLPVKDRDFVVVGTTPEVMVAEGYLPVGKDFPVFLHPHTREEYALARTERKTAPGYKGFVIHADPAVSLEQDLARRDFTVNAIAQADDGTLIDPYHGQADLVARKLRHVSTAFSEDPVRILRAARFMARFQDFSIAPETMALMRDMVAAGEVDALVPERVWQELARGLMEARPSRMFMVLRECGALTRILPELDALFGVAQPEQHHPEIDTGVHVMMVVDYAASAGFDLPVRFAALMHDVGKGLTPPALWPKHHGHENSGVALVKALCTRLRIPKECTDLAVLATRYHGDIHRAQQLRADTVVKLLGAVDAYRRPERFVQLLQACLADARGRLGFEQVAYPQMDYMQAALAVAVGIDTAAIVAAVTHPAQMGERVTAARVAALTVWMNR*