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RTP_11222018_0_1um_scaffold_1299

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_1299_1
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..101)
DNA (99bp) protein (33aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WL01_9BURK
mreB; actin-like component MreB (cell wall structural complex MreBCD, DNA segregation)
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_11222018_0_1um_scaffold_1299_2
GWF2_Sideroxydans_59_14_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

222..509
DNA (288bp) protein (96aa)
Putative Glutamyl-tRNA(Gln) amidotransferase subunit C (Glu-ADT subunit C) n=1 Tax=mine drainage metagenome RepID=E6QNQ3_9ZZZZ
glutamyl-tRNA(Gln) amidotransferase, C subunit
Tax=GWF2_Sideroxydans_59_14_curated
RTP_11222018_0_1um_scaffold_1299_3

Not on your lists

514..1965
DNA (1452bp) protein (484aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) {ECO:0000313|EMBL:CBI08873.1}; EC=6.3.5.- {ECO:0000313|EMBL:CBI08873.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) n=1 Tax=mine drainage metagenome RepID=E6QNQ2_9ZZZZ
glutamyl-tRNA(Gln) amidotransferase, A subunit
RTP_11222018_0_1um_scaffold_1299_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1994..2575
DNA (582bp) protein (194aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000313|EMBL:KIO49668.1};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJQ4_9PROT
RTP_11222018_0_1um_scaffold_1299_5

Not on your lists

2536..3363
DNA (828bp) protein (276aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) {ECO:0000313|EMBL:CBI08872.1}; EC=6.3.5.- {ECO:0000313|EMBL:CBI08872.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) n=1 Tax=mine drainage metagenome RepID=E6QNQ1_9ZZZZ
gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
RTP_11222018_0_1um_scaffold_1299_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3431..4237
DNA (807bp) protein (269aa)
Putative uncharacterized protein id=1337188 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_11222018_0_1um_scaffold_1299_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4333..4983)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003647CF7
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_11222018_0_1um_scaffold_1299_8
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4980..5549)
DNA (570bp) protein (190aa)
hypothetical protein
Putative uncharacterized protein id=1910423 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Tax=CG_Beta_01
RTP_11222018_0_1um_scaffold_1299_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5644..6123)
DNA (480bp) protein (160aa)
Orotate phosphoribosyltransferase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QIB9_AZOSU
orotate phosphoribosyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
RTP_11222018_0_1um_scaffold_1299_10
Methylotenera mobilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6147..6923
DNA (777bp) protein (259aa)
exodeoxyribonuclease III Xth (EC:4.2.99.18)
Exodeoxyribonuclease III Xth {ECO:0000313|EMBL:ACT49149.1}; EC=4.2.99.18 {ECO:0000313|EMBL:ACT49149.1};; TaxID=583345 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540).;"
exodeoxyribonuclease III n=1 Tax=Methylophilus methylotrophus RepID=UPI0003632E89
RTP_11222018_0_1um_scaffold_1299_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7053..8417
DNA (1365bp) protein (455aa)
putative transport transmembrane protein; K08218 MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG id=12494111 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transport transmembrane protein
Putative transport transmembrane protein {ECO:0000313|EMBL:AAZ96206.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_11222018_0_1um_scaffold_1299_12
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8410..9078
DNA (669bp) protein (223aa)
Membrane protein {ECO:0000313|EMBL:GAO36798.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
hypothetical protein; K09792 hypothetical protein id=12494108 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
RTP_11222018_0_1um_scaffold_1299_13
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9085..10362
DNA (1278bp) protein (426aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; Flags: Precursor;; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
Sun protein n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X8G6_METSD
sun protein
RTP_11222018_0_1um_scaffold_1299_14
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10400..10903
DNA (504bp) protein (168aa)
signal peptide protein n=1 Tax=Methyloversatilis universalis RepID=UPI00036418A7
hypothetical protein
Tax=CG_Hydro_01
RTP_11222018_0_1um_scaffold_1299_15
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10900..13029
DNA (2130bp) protein (710aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Histidine kinase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAM0_9PROT
histidine kinase
RTP_11222018_0_1um_scaffold_1299_16
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13026..13673
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI0003616F65
Transcriptional regulatory protein YycF {ECO:0000313|EMBL:GAO33210.1}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
Fis family transcriptional regulator
RTP_11222018_0_1um_scaffold_1299_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

13746..14354
DNA (609bp) protein (203aa)
Molybdenum ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QU83_METTR
molybdenum ABC transporter periplasmic molybdate-binding protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
RTP_11222018_0_1um_scaffold_1299_18
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

14351..15049
DNA (699bp) protein (233aa)
Molybdate ABC transporter, inner membrane subunit n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVQ8_OPITP
molybdate ABC transporter inner membrane subunit
Molybdate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ACB74994.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
RTP_11222018_0_1um_scaffold_1299_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15116..15577)
DNA (462bp) protein (154aa)
Outer membrane lipoprotein, putative id=1333496 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
outer membrane lipoprotein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_11222018_0_1um_scaffold_1299_20
GWA2_Gallionellales_55_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15621..16562)
DNA (942bp) protein (314aa)
sugar kinase n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI00037D66E2
PfkB
Tax=GWA2_Gallionellales_55_18_curated
RTP_11222018_0_1um_scaffold_1299_21

Not on your lists

16680..17522
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QTG5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI10537.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_1299_22
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17578..17811)
DNA (234bp) protein (78aa)
Thiol-disulfide isomerase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AE35_9PROT
Glutaredoxin {ECO:0000313|EMBL:KHD03652.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
thiol-disulfide isomerase
RTP_11222018_0_1um_scaffold_1299_23
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17992..18306)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036E10CA
Uncharacterized protein {ECO:0000313|EMBL:GAO35391.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_1299_24
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18336..19397)
DNA (1062bp) protein (354aa)
Permease n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AE37_9PROT
permease
Permease {ECO:0000313|EMBL:BAN36903.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_11222018_0_1um_scaffold_1299_25
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19586..20029
DNA (444bp) protein (148aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
Arsenate reductase n=1 Tax=Burkholderia multivorans (strain ATCC 17616 / 249) RepID=A9AS15_BURM1
arsC1; arsenate reductase
RTP_11222018_0_1um_scaffold_1299_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20153..21190
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C8E29
nucleoside-diphosphate-sugar epimerase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_11222018_0_1um_scaffold_1299_27
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21194..22408
DNA (1215bp) protein (405aa)
cca; tRNA nucleotidyltransferase (EC:2.7.7.72)
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI0002F3B02B
Multifunctional CCA protein {ECO:0000256|HAMAP-Rule:MF_01261, ECO:0000256|SAAS:SAAS00054545}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
RTP_11222018_0_1um_scaffold_1299_28

Not on your lists

22405..22941
DNA (537bp) protein (179aa)
Putative Histidinol-phosphate phosphatase {ECO:0000313|EMBL:CBI11935.1}; EC=3.1.3.15 {ECO:0000313|EMBL:CBI11935.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Putative Histidinol-phosphate phosphatase n=1 Tax=mine drainage metagenome RepID=E6QXG1_9ZZZZ
histidinol-phosphate phosphatase family protein
RTP_11222018_0_1um_scaffold_1299_29

Not on your lists

22938..23639
DNA (702bp) protein (234aa)
Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:CBI11933.1}; EC=2.3.1.51 {ECO:0000313|EMBL:CBI11933.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=mine drainage metagenome RepID=E6QXF9_9ZZZZ
phospholipid/glycerol acyltransferase
RTP_11222018_0_1um_scaffold_1299_30

Not on your lists

23643..24362
DNA (720bp) protein (240aa)
Putative metal-dependent hydrolase n=1 Tax=mine drainage metagenome RepID=E6QXF8_9ZZZZ
Putative metal-dependent hydrolase {ECO:0000313|EMBL:CBI11932.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
Displaying items 1-30 of 42 in total

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