ggKbase home page

RTP_11222018_0_1um_scaffold_2315_11

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(6644..7471)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 275.0
  • Bit_score: 424
  • Evalue 1.10e-115
ribosomal protein S12 methylthiotransferase n=1 Tax=Leeia oryzae RepID=UPI00037B8E48 similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 275.0
  • Bit_score: 417
  • Evalue 7.00e-114
rimO; hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 275.0
  • Bit_score: 416
  • Evalue 4.40e-114

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ferriphaselus amnicola → Ferriphaselus → Gallionellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
GTGAGTCGCCCTATCGGCGATGTGATGCAAGAAGCTGAACGTCTGGCTGAGGCGGGTGTGAAAGAGTTGTTGGTGATTTCGCAAGATACCAGTGCGTATGGCGTGGATGTGAAATATCGTACAGGGTTCTGGCAAGGTAGACCGTTGCGTACACGCATGACGGAATTAGCGGCGGCATTATCTGAGCTTGATGTATGGGTGCGTTTGCATTATGTCTATCCGTATCCTCATGTGGATGAAATTATCCCGCTTATGGCAGAAGGCAAGATTCTACCGTATCTAGATATTCCATTTCAGCATGCTAGTCCACGTATTCTGAAAGCAATGAAACGTCCAGCCGCTGCAGAAAACACCTTGGCACGTATTCGGGCTTGGCGTGAAATTTGCCCAGAGCTGGTGATACGCAGCACGTTTATTACTGGTTTTCCAGGTGAAACTGAAGATGATTTCCAGCAATTAATGGATTTCATTGACGCGGCTGAATTGGATAGGGTAGGTTGTTTTACTTATTCGGCTGTTGATGGTGCAACGGCAAATGCATTGCCAGACCACGTACCCGAAGAAATTAAAGAAGAACGCCGTGCGCGTTTGATGGAACGACAAGCTGATATTAGTGCTGATCGTTTGGAGGCCCGTATCGGTCAGACGATGACAGTGTTGATAGATGAAATCAGTGCAGAAGGTGCGATAGGGCGTAGCTATGCCGATGCGCCTGAAATAGATGGTGTGGTGGTGATTGAAGACTACGCGGGTTTAGTGGTGGGTGAGTTTGTGACAGTAGCCATTACAGATAGCGGAGAGCATGATTTGTGGGGTGAGGTCGTCTAG
PROTEIN sequence
Length: 276
VSRPIGDVMQEAERLAEAGVKELLVISQDTSAYGVDVKYRTGFWQGRPLRTRMTELAAALSELDVWVRLHYVYPYPHVDEIIPLMAEGKILPYLDIPFQHASPRILKAMKRPAAAENTLARIRAWREICPELVIRSTFITGFPGETEDDFQQLMDFIDAAELDRVGCFTYSAVDGATANALPDHVPEEIKEERRARLMERQADISADRLEARIGQTMTVLIDEISAEGAIGRSYADAPEIDGVVVIEDYAGLVVGEFVTVAITDSGEHDLWGEVV*