name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RTP_11222018_0_1um_scaffold_2315_1
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..553)
|
flagellar L-ring protein FlgH; K02393 flagellar L-ring protein precursor FlgH id=12498517 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
flgH; FlgH flagellar basal body L-ring protein
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Flags: Precursor;; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
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RTP_11222018_0_1um_scaffold_2315_2
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(564..1346)
|
flagellar basal body rod protein FlgG n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00030FFCA5
Flagellar basal body rod protein FlgG {ECO:0000313|EMBL:KIF82159.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
flagellar basal-body rod protein FlgG
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RTP_11222018_0_1um_scaffold_2315_3
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1398..2138)
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hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F4CF46
Flagellar basal body rod protein FlgF {ECO:0000313|EMBL:KIF82160.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
flgF; flagellar basal-body rod protein flgf
|
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RTP_11222018_0_1um_scaffold_2315_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(2163..3377)
|
flagellar hook protein FlgE n=1 Tax=Thiobacillus thioparus RepID=UPI0003768699
flgE; flagellar hook protein FlgE
Flagellar hook protein FlgE {ECO:0000313|EMBL:AAZ97587.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
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RTP_11222018_0_1um_scaffold_2315_5
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(3399..4070)
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Flagellar basal-body rod modification protein FlgD n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VUE4_9BURK
Flagellar basal-body rod modification protein FlgD {ECO:0000313|EMBL:EGF33753.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
flgD; flagellar basal body rod modification protein
|
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RTP_11222018_0_1um_scaffold_2315_6
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(4086..4490)
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flagellar basal body rod protein FlgC n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002EF2EDC
flgC; flagellar basal-body rod protein flgc
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
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RTP_11222018_0_1um_scaffold_2315_7
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4496..4903)
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Flagellar basal body rod protein FlgB n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VUE2_9BURK
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
flgB; basal-body rod protein
|
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RTP_11222018_0_1um_scaffold_2315_8
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5068..5754
|
flagellar basal body P-ring biosynthesis protein FlgA n=1 Tax=Janthinobacterium lividum RepID=UPI000288194A
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
flgA; flagella basal body P-ring formation protein FlgA
|
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RTP_11222018_0_1um_scaffold_2315_9
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5857..6171
|
Anti-sigma-28 factor, FlgM n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DJ48_METS0
anti-sigma-28 factor FlgM
Anti-sigma-28 factor, FlgM {ECO:0000313|EMBL:ADI30083.1}; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
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RTP_11222018_0_1um_scaffold_2315_10
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6174..6647
|
Flagella synthesis protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SXV8_JANMA
flgN; flagella synthesis protein
Flagella synthesis protein {ECO:0000313|EMBL:ABR88357.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
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RTP_11222018_0_1um_scaffold_2315_11
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(6644..7471)
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Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
ribosomal protein S12 methylthiotransferase n=1 Tax=Leeia oryzae RepID=UPI00037B8E48
rimO; hypothetical protein
|
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RTP_11222018_0_1um_scaffold_2315_12
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7468..7959)
|
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
Ribosomal protein S12 methylthiotransferase RimO n=2 Tax=Methylovorus RepID=C6XEH1_METSD
rimO; 30S ribosomal protein S12 methylthiotransferase
|
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RTP_11222018_0_1um_scaffold_2315_13
unknown
|
Not on your lists |
7981..8187
|
This feature has no annotations |
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RTP_11222018_0_1um_scaffold_2315_14
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8178..8960)
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Zinc/iron permease n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACK4_9PROT
zinc transporter ZIP
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
|
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RTP_11222018_0_1um_scaffold_2315_15
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9017..9742)
|
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PW97_9RHOO
hypothetical protein
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
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RTP_11222018_0_1um_scaffold_2315_16
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(9739..10710)
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Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
Pseudouridine synthase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTV4_SIDLE
pseudouridine synthase, RluA family
|
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RTP_11222018_0_1um_scaffold_2315_17
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10829..11500
|
Outer membrane protein assembly factor BamD n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RM95_ACCPU
outer membrane assembly lipoprotein YfiO
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
|
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RTP_11222018_0_1um_scaffold_2315_18
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11504..12169
|
HAD family hydrolase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AD00_9PROT
HAD family hydrolase
Tax=CG_Beta_01
|
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RTP_11222018_0_1um_scaffold_2315_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12172..13518
|
poly(A) polymerase n=1 Tax=Thiobacillus thioparus RepID=UPI0003638918
poly(A) polymerase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
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RTP_11222018_0_1um_scaffold_2315_20
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13511..14023
|
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (EC:2.7.6.3)
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI0003772DDD
Tax=RBG_16_Betaproteobacteria_58_11_curated
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RTP_11222018_0_1um_scaffold_2315_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
14030..14815
|
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase id=1340316 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
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RTP_11222018_0_1um_scaffold_2315_22
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
14812..15579
|
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=PANC_THIDA
Tax=RBG_16_Betaproteobacteria_58_11_curated
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RTP_11222018_0_1um_scaffold_2315_23
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15824..16201
|
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000378A935
hypothetical protein
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
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