ggKbase home page

RTP_11222018_0_1um_scaffold_2315_2

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(564..1346)

Top 3 Functional Annotations

Value Algorithm Source
flagellar basal body rod protein FlgG n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00030FFCA5 similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 260.0
  • Bit_score: 459
  • Evalue 1.20e-126
Flagellar basal body rod protein FlgG {ECO:0000313|EMBL:KIF82159.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 260.0
  • Bit_score: 457
  • Evalue 8.10e-126
flagellar basal-body rod protein FlgG similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 260.0
  • Bit_score: 443
  • Evalue 4.20e-122

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGATACGTTCATTATGGATAGCTAGAACTGGTTTAGATGCACAGCAAACACAGATGGATGTGATTGCGAACAACTTAGCCAACGTTAGCACCAACGGCTTTAAGCGGTCGCGTGCGGTTTTTGAAGACCTGCTGTATCAGACCATGCGTCAACCTGGTGCGCAATCTTCCCAACAAACCCAATTACCTTCAGGTTTGCAAGTGGGTACAGGGGTGCGTCCCGTTGCAACTGAACGTATTTTTACGCAGGGTAATTTGCAACAAACCAGTAATGATAAGGACGTGGCGATACAAGGTGCGGGTTTTTTTCAGGTACTGTTGCCTGATGGCGCAACCGCTTATACACGCGACGGCTCATTTCAAGTAGATAACCAGGGGCAGTTGGTGACCTCAAGCGGTTTTGTTATTCAGCCGGCCATTACCATTCCTGCAAATGCGCAAAGCGTGACCATAGGCCGTGACGGTACGGTGTCAGTCACTCAGCCTGGCGTAACTACGCCCGTGCAAGTTGGCTCATTGCAACTGGCGACATTTATTAACAACGCAGGTCTGGAAAGCCGGGGTGAAAATTTGTTTGTAGAAACTGCCGCATCAGGTAGCCCCAATACCAATACACCAGGCACGAATGGGGCGGGATTGCTGAATCAAGGTTATGTAGAAACTTCTAACGTTAATGTCGCAGAAGAGCTGGTTAACATGATAGCGACACAGCGCGCTTATGAGATTAATAGCAAGGCGATTACAACATCCGATCAGATGTTGCAAAAATTGACACAGCTATAA
PROTEIN sequence
Length: 261
MIRSLWIARTGLDAQQTQMDVIANNLANVSTNGFKRSRAVFEDLLYQTMRQPGAQSSQQTQLPSGLQVGTGVRPVATERIFTQGNLQQTSNDKDVAIQGAGFFQVLLPDGATAYTRDGSFQVDNQGQLVTSSGFVIQPAITIPANAQSVTIGRDGTVSVTQPGVTTPVQVGSLQLATFINNAGLESRGENLFVETAASGSPNTNTPGTNGAGLLNQGYVETSNVNVAEELVNMIATQRAYEINSKAITTSDQMLQKLTQL*